Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SEMA4DQ92854 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA4DQ92854 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SEMA4DQ92854 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SEMA4DQ92854 ZNF815P-204ENST00000434898 1737 ntBASIC20.95■□□□□ 0.94
SEMA4DQ92854 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
SEMA4DQ92854 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SEMA4DQ92854 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SEMA4DQ92854 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SEMA4DQ92854 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SEMA4DQ92854 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.95■□□□□ 0.94
SEMA4DQ92854 AC110285.5-201ENST00000611501 352 ntBASIC20.95■□□□□ 0.94
SEMA4DQ92854 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEMA4DQ92854 AL032819.2-201ENST00000624543 2162 ntBASIC20.95■□□□□ 0.94
SEMA4DQ92854 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 LINC01465-201ENST00000408887 1940 ntBASIC20.94■□□□□ 0.94
SEMA4DQ92854 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 AC098590.1-201ENST00000468126 897 ntBASIC20.94■□□□□ 0.94
SEMA4DQ92854 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 AL359736.2-201ENST00000621992 437 ntBASIC20.94■□□□□ 0.94
SEMA4DQ92854 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 AC104417.2-201ENST00000562989 1793 ntBASIC20.94■□□□□ 0.94
SEMA4DQ92854 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEMA4DQ92854 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SEMA4DQ92854 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 C1QL1P1-201ENST00000568105 661 ntBASIC20.93■□□□□ 0.94
SEMA4DQ92854 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.93■□□□□ 0.94
SEMA4DQ92854 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.93■□□□□ 0.94
SEMA4DQ92854 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEMA4DQ92854 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
SEMA4DQ92854 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SEMA4DQ92854 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SEMA4DQ92854 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
SEMA4DQ92854 SDHAP1-207ENST00000440850 2000 ntBASIC20.92■□□□□ 0.94
SEMA4DQ92854 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SEMA4DQ92854 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 KRT16P5-201ENST00000455284 522 ntBASIC20.92■□□□□ 0.94
SEMA4DQ92854 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SEMA4DQ92854 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.92■□□□□ 0.94
SEMA4DQ92854 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SEMA4DQ92854 AC004264.1-201ENST00000608354 794 ntBASIC20.92■□□□□ 0.94
SEMA4DQ92854 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEMA4DQ92854 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms