Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 RARRES2P6-201ENST00000567333 442 ntBASIC15.35■□□□□ 0.05
NPIPB3Q92617 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 AC005181.1-201ENST00000604782 1256 ntBASIC15.35■□□□□ 0.05
NPIPB3Q92617 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPB3Q92617 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPB3Q92617 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPB3Q92617 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NPIPB3Q92617 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPB3Q92617 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPB3Q92617 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPB3Q92617 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.34■□□□□ 0.05
NPIPB3Q92617 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPB3Q92617 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPB3Q92617 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPB3Q92617 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPB3Q92617 BCL2-203ENST00000589955 5011 ntBASIC15.33■□□□□ 0.05
NPIPB3Q92617 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPB3Q92617 AC116351.2-201ENST00000606540 1585 ntBASIC15.33■□□□□ 0.05
NPIPB3Q92617 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPB3Q92617 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPB3Q92617 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPB3Q92617 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.33■□□□□ 0.04
NPIPB3Q92617 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPB3Q92617 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPB3Q92617 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPB3Q92617 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPB3Q92617 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPB3Q92617 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 AL162430.1-201ENST00000480705 870 ntBASIC15.32■□□□□ 0.04
NPIPB3Q92617 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB3Q92617 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPB3Q92617 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms