Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HLA-A-209ENST00000638375 975 ntBASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
SHKBP1Q8TBC3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 AC073508.3-201ENST00000619697 1419 ntBASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 AL137013.1-201ENST00000432946 1228 ntBASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SHKBP1Q8TBC3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 BX119927.1-201ENST00000636596 1552 ntBASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 AC097488.1-201ENST00000507834 756 ntBASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHKBP1Q8TBC3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 C2orf69P3-201ENST00000565542 1120 ntBASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHKBP1Q8TBC3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 CRYGFP-201ENST00000418459 633 ntBASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 AC008040.2-201ENST00000461049 708 ntBASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.41■□□□□ 0.86
SHKBP1Q8TBC3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms