Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 AL135905.2-201ENST00000584934 1404 ntBASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 TSPY7P-201ENST00000431358 1114 ntBASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 MIR4497-201ENST00000583208 89 ntBASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 AF186192.3-201ENST00000583427 947 ntBASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD3Q6PCD5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 YBX1P10-201ENST00000444752 975 ntBASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RFWD3Q6PCD5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
RFWD3Q6PCD5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFWD3Q6PCD5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RFWD3Q6PCD5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RFWD3Q6PCD5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.27■□□□□ 0.83
RFWD3Q6PCD5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 AP001271.2-201ENST00000624018 1556 ntBASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
RFWD3Q6PCD5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms