Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH3PXD2BA1X283 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 AL031963.3-201ENST00000606441 850 ntBASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 BID-214ENST00000617586 542 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 AC013268.1-206ENST00000638368 961 ntBASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 AC112229.1-201ENST00000639295 961 ntBASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SH3PXD2BA1X283 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SH3PXD2BA1X283 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 MCRIP2P1-201ENST00000394346 511 ntBASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 AC100791.3-201ENST00000617619 330 ntBASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 AP001271.2-201ENST00000624018 1556 ntBASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
SH3PXD2BA1X283 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms