Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17■□□□□ 0.31
SHISA3A0PJX4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 MIR638-201ENST00000385237 100 ntBASIC16.99■□□□□ 0.31
SHISA3A0PJX4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 AC067852.2-201ENST00000590513 2313 ntBASIC16.99■□□□□ 0.31
SHISA3A0PJX4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.99■□□□□ 0.31
SHISA3A0PJX4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHISA3A0PJX4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHISA3A0PJX4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 KRT18P61-201ENST00000585825 1298 ntBASIC16.97■□□□□ 0.31
SHISA3A0PJX4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 AL591742.1-201ENST00000604433 565 ntBASIC16.97■□□□□ 0.31
SHISA3A0PJX4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHISA3A0PJX4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms