Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 TREX1-205ENST00000625293 1783 ntBASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM238LA0A1B0GVL6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 AF131216.4-201ENST00000638924 1588 ntBASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 AL031602.1-201ENST00000633169 911 ntBASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 FLJ16779-201ENST00000612722 7638 ntBASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM238LA0A1B0GVL6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 POM121L4P-202ENST00000427789 1891 ntBASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 LONRF2P2-201ENST00000439212 571 ntBASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM238LA0A1B0GVL6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms