Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LIMA1-201ENST00000341247 3706 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 LRRTM4-204ENST00000409884 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 LST1-201ENST00000211921 504 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SLPI-201ENST00000338380 596 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 MYL9-202ENST00000346786 1024 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 LST1-211ENST00000376110 433 ntTSL 3 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SNORA80B-201ENST00000383906 136 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SNORA26.3-201ENST00000391119 136 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR922-201ENST00000401223 81 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AL121835.1-201ENST00000404250 354 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RNA5SP31-201ENST00000411144 127 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC007322.2-201ENST00000414540 605 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 CRIP1P3-201ENST00000416794 220 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 DNM1P48-201ENST00000419538 439 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 HLA-DQB3-203ENST00000425319 356 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AL365496.1-201ENST00000426885 215 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 CHCHD2P1-201ENST00000429986 443 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RPEP4-201ENST00000437636 602 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 Z75741.1-201ENST00000446793 314 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RPL18AP2-201ENST00000450007 482 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AL133244.1-201ENST00000456007 258 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 LAMTOR4-203ENST00000460732 616 ntTSL 3 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL26P-201ENST00000460792 307 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC020978.1-201ENST00000465542 337 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL801P-201ENST00000479462 302 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL307P-201ENST00000490342 295 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RNU6-523P-201ENST00000516304 54 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RNU6-347P-201ENST00000516658 105 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 Y_RNA.705-201ENST00000516862 110 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC008514.1-203ENST00000518172 574 ntTSL 4 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RNF41-211ENST00000552656 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC091544.3-202ENST00000554246 373 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RHOJ-202ENST00000555125 548 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 TRAPPC2L-202ENST00000561840 558 ntTSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC005829.1-202ENST00000562555 298 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC099668.1-201ENST00000563780 423 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC009132.1-201ENST00000565194 320 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR4694-201ENST00000578534 80 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC019159.1-201ENST00000605094 187 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC243830.1-201ENST00000610398 455 ntTSL 3 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR8079-201ENST00000610873 72 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 KRTAP4-7-202ENST00000621138 423 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 TAF2-201ENST00000378164 5048 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 TXNDC16-201ENST00000281741 4564 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 OGDHL-203ENST00000432695 3383 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SOX13-210ENST00000618875 3476 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 VWA5A-202ENST00000392744 2691 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF215-201ENST00000278319 3448 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC127459.1-201ENST00000563129 2768 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 BORA-206ENST00000613797 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 GPR155-201ENST00000295500 3930 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF473-201ENST00000270617 4688 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC006330.1-201ENST00000624598 1987 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RAB18-201ENST00000356940 4886 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 GPBP1L1-202ENST00000355105 3736 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 EEF1GP5-201ENST00000434365 1310 ntBASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 TEX10-201ENST00000374902 3074 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 SYNE1-204ENST00000367248 7165 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 CD28-202ENST00000374481 4526 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP3-3Q9BYR6 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 252.6 ms