RNA–Protein interactions for RNA: ENST00000615384.1

PCDHGB4-202, Transcript of protocadherin gamma subfamily B, 4, humanhuman

APPRIS P1 BASIC

Gene PCDHGB4, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-202ENST00000615384 NISCHQ9Y2I1 1504 aa21.89■■□□□ 1.09
PCDHGB4-202ENST00000615384 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
PCDHGB4-202ENST00000615384 ABCC9O60706 1549 aa19.92■□□□□ 0.78
PCDHGB4-202ENST00000615384 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
PCDHGB4-202ENST00000615384 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
PCDHGB4-202ENST00000615384 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
PCDHGB4-202ENST00000615384 SUPT5HO00267 1087 aaKnown RBP19.12■□□□□ 0.65
PCDHGB4-202ENST00000615384 MYT1Q01538 1121 aa19.1■□□□□ 0.65
PCDHGB4-202ENST00000615384 CCDC180Q9P1Z9 1646 aa18.6■□□□□ 0.57
PCDHGB4-202ENST00000615384 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
PCDHGB4-202ENST00000615384 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
PCDHGB4-202ENST00000615384 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
PCDHGB4-202ENST00000615384 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
PCDHGB4-202ENST00000615384 NACADO15069 1562 aa18.18■□□□□ 0.5
PCDHGB4-202ENST00000615384 FBLN2P98095 1184 aa18.06■□□□□ 0.48
PCDHGB4-202ENST00000615384 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
PCDHGB4-202ENST00000615384 RANGAP1P46060 587 aaPredicted RBP18■□□□□ 0.47
PCDHGB4-202ENST00000615384 ZCCHC6Q5VYS8 1495 aaKnown RBP17.97■□□□□ 0.47
PCDHGB4-202ENST00000615384 PCGF6Q9BYE7 350 aa17.91■□□□□ 0.46
PCDHGB4-202ENST00000615384 ATP1B4Q9UN42 357 aaPredicted RBP17.89■□□□□ 0.45
PCDHGB4-202ENST00000615384 HRCP23327 699 aa17.89■□□□□ 0.45
PCDHGB4-202ENST00000615384 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
PCDHGB4-202ENST00000615384 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
PCDHGB4-202ENST00000615384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
PCDHGB4-202ENST00000615384 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
PCDHGB4-202ENST00000615384 APLP2Q06481 763 aa17.73■□□□□ 0.43
PCDHGB4-202ENST00000615384 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
PCDHGB4-202ENST00000615384 UBTFP17480 764 aaKnown RBP17.65■□□□□ 0.42
PCDHGB4-202ENST00000615384 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.41
PCDHGB4-202ENST00000615384 CENPBP07199 599 aaPredicted RBP17.62■□□□□ 0.41
PCDHGB4-202ENST00000615384 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
PCDHGB4-202ENST00000615384 PPARGC1BQ86YN6 1023 aaKnown RBP17.57■□□□□ 0.4
PCDHGB4-202ENST00000615384 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
PCDHGB4-202ENST00000615384 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
PCDHGB4-202ENST00000615384 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
PCDHGB4-202ENST00000615384 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
PCDHGB4-202ENST00000615384 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
PCDHGB4-202ENST00000615384 DCAF1Q9Y4B6 1507 aa17.44■□□□□ 0.38
PCDHGB4-202ENST00000615384 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
PCDHGB4-202ENST00000615384 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
PCDHGB4-202ENST00000615384 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
PCDHGB4-202ENST00000615384 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
PCDHGB4-202ENST00000615384 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
PCDHGB4-202ENST00000615384 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
PCDHGB4-202ENST00000615384 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
PCDHGB4-202ENST00000615384 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
PCDHGB4-202ENST00000615384 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
PCDHGB4-202ENST00000615384 ARID3CA6NKF2 412 aa17.15■□□□□ 0.34
PCDHGB4-202ENST00000615384 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
PCDHGB4-202ENST00000615384 GTF3C3Q9Y5Q9 886 aa17.09■□□□□ 0.33
PCDHGB4-202ENST00000615384 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
PCDHGB4-202ENST00000615384 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
PCDHGB4-202ENST00000615384 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
PCDHGB4-202ENST00000615384 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
PCDHGB4-202ENST00000615384 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
PCDHGB4-202ENST00000615384 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
PCDHGB4-202ENST00000615384 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
PCDHGB4-202ENST00000615384 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
PCDHGB4-202ENST00000615384 PRKCSHP14314 528 aaPredicted RBP17■□□□□ 0.31
PCDHGB4-202ENST00000615384 TRIM26Q12899 539 aaPredicted RBP16.95■□□□□ 0.3
PCDHGB4-202ENST00000615384 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
PCDHGB4-202ENST00000615384 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
PCDHGB4-202ENST00000615384 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
PCDHGB4-202ENST00000615384 NEFLP07196 543 aa16.91■□□□□ 0.3
PCDHGB4-202ENST00000615384 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
PCDHGB4-202ENST00000615384 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
PCDHGB4-202ENST00000615384 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
PCDHGB4-202ENST00000615384 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
PCDHGB4-202ENST00000615384 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
PCDHGB4-202ENST00000615384 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
PCDHGB4-202ENST00000615384 TDRD9Q8NDG6 1382 aaKnown RBP16.82■□□□□ 0.28
PCDHGB4-202ENST00000615384 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
PCDHGB4-202ENST00000615384 ITGAEP38570 1179 aa16.77■□□□□ 0.28
PCDHGB4-202ENST00000615384 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
PCDHGB4-202ENST00000615384 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
PCDHGB4-202ENST00000615384 SOGA1O94964 1423 aa16.75■□□□□ 0.27
PCDHGB4-202ENST00000615384 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
PCDHGB4-202ENST00000615384 SMARCA4P51532 1647 aa16.75■□□□□ 0.27
PCDHGB4-202ENST00000615384 ARID4BQ4LE39 1312 aaPredicted RBP16.74■□□□□ 0.27
PCDHGB4-202ENST00000615384 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
PCDHGB4-202ENST00000615384 NEUROD1Q13562 356 aa16.71■□□□□ 0.26
PCDHGB4-202ENST00000615384 NESP48681 1621 aa16.7■□□□□ 0.26
PCDHGB4-202ENST00000615384 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
PCDHGB4-202ENST00000615384 BCANQ96GW7 911 aa16.65■□□□□ 0.26
PCDHGB4-202ENST00000615384 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
PCDHGB4-202ENST00000615384 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
PCDHGB4-202ENST00000615384 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
PCDHGB4-202ENST00000615384 CUX2O14529 1486 aa16.61■□□□□ 0.25
PCDHGB4-202ENST00000615384 PLEKHD1A6NEE1 506 aa16.6■□□□□ 0.25
PCDHGB4-202ENST00000615384 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
PCDHGB4-202ENST00000615384 WIZO95785 1651 aa16.58■□□□□ 0.24
PCDHGB4-202ENST00000615384 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
PCDHGB4-202ENST00000615384 ABCC8Q09428 1581 aa16.54■□□□□ 0.24
PCDHGB4-202ENST00000615384 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
PCDHGB4-202ENST00000615384 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
PCDHGB4-202ENST00000615384 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
PCDHGB4-202ENST00000615384 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
PCDHGB4-202ENST00000615384 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
PCDHGB4-202ENST00000615384 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
PCDHGB4-202ENST00000615384 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms