RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
LRRTM4-204ENST00000409884 CCDC180Q9P1Z9 1646 aa20.72■□□□□ 0.91
LRRTM4-204ENST00000409884 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.8
LRRTM4-204ENST00000409884 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.79
LRRTM4-204ENST00000409884 ABCC9O60706 1549 aa19.87■□□□□ 0.77
LRRTM4-204ENST00000409884 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
LRRTM4-204ENST00000409884 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
LRRTM4-204ENST00000409884 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
LRRTM4-204ENST00000409884 NACADO15069 1562 aa19.33■□□□□ 0.68
LRRTM4-204ENST00000409884 SCRIBQ14160 1630 aa19.28■□□□□ 0.68
LRRTM4-204ENST00000409884 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
LRRTM4-204ENST00000409884 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
LRRTM4-204ENST00000409884 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
LRRTM4-204ENST00000409884 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
LRRTM4-204ENST00000409884 CECR2Q9BXF3 1484 aa18.72■□□□□ 0.59
LRRTM4-204ENST00000409884 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
LRRTM4-204ENST00000409884 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
LRRTM4-204ENST00000409884 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
LRRTM4-204ENST00000409884 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
LRRTM4-204ENST00000409884 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
LRRTM4-204ENST00000409884 WIZO95785 1651 aa18.42■□□□□ 0.54
LRRTM4-204ENST00000409884 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
LRRTM4-204ENST00000409884 MYT1Q01538 1121 aa18.18■□□□□ 0.5
LRRTM4-204ENST00000409884 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
LRRTM4-204ENST00000409884 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
LRRTM4-204ENST00000409884 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
LRRTM4-204ENST00000409884 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
LRRTM4-204ENST00000409884 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
LRRTM4-204ENST00000409884 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.47
LRRTM4-204ENST00000409884 SMARCA2P51531 1590 aa18■□□□□ 0.47
LRRTM4-204ENST00000409884 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
LRRTM4-204ENST00000409884 CC2D2AQ9P2K1 1620 aa17.89■□□□□ 0.45
LRRTM4-204ENST00000409884 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
LRRTM4-204ENST00000409884 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
LRRTM4-204ENST00000409884 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
LRRTM4-204ENST00000409884 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
LRRTM4-204ENST00000409884 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
LRRTM4-204ENST00000409884 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
LRRTM4-204ENST00000409884 LOC105371045A0A1W2PR82 267 aa17.55■□□□□ 0.4
LRRTM4-204ENST00000409884 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
LRRTM4-204ENST00000409884 CFTRP13569 1480 aa17.52■□□□□ 0.4
LRRTM4-204ENST00000409884 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
LRRTM4-204ENST00000409884 EHMT2Q96KQ7 1210 aa17.48■□□□□ 0.39
LRRTM4-204ENST00000409884 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
LRRTM4-204ENST00000409884 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
LRRTM4-204ENST00000409884 NESP48681 1621 aa17.47■□□□□ 0.39
LRRTM4-204ENST00000409884 SOGA1O94964 1423 aa17.39■□□□□ 0.37
LRRTM4-204ENST00000409884 RUSC2Q8N2Y8 1516 aa17.36■□□□□ 0.37
LRRTM4-204ENST00000409884 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
LRRTM4-204ENST00000409884 CUX1P39880 1505 aa17.33■□□□□ 0.37
LRRTM4-204ENST00000409884 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
LRRTM4-204ENST00000409884 TOP2BQ02880 1626 aa17.31■□□□□ 0.36
LRRTM4-204ENST00000409884 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
LRRTM4-204ENST00000409884 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
LRRTM4-204ENST00000409884 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
LRRTM4-204ENST00000409884 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
LRRTM4-204ENST00000409884 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
LRRTM4-204ENST00000409884 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
LRRTM4-204ENST00000409884 FGD5Q6ZNL6 1462 aa17.14■□□□□ 0.33
LRRTM4-204ENST00000409884 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
LRRTM4-204ENST00000409884 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
LRRTM4-204ENST00000409884 PRKCSHP14314 528 aaPredicted RBP17.12■□□□□ 0.33
LRRTM4-204ENST00000409884 EEA1Q15075 1411 aa17.11■□□□□ 0.33
LRRTM4-204ENST00000409884 DNMBPQ6XZF7 1577 aa17.09■□□□□ 0.33
LRRTM4-204ENST00000409884 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
LRRTM4-204ENST00000409884 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
LRRTM4-204ENST00000409884 CUX2O14529 1486 aa17.04■□□□□ 0.32
LRRTM4-204ENST00000409884 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
LRRTM4-204ENST00000409884 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
LRRTM4-204ENST00000409884 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
LRRTM4-204ENST00000409884 GOLGA3Q08378 1498 aa16.97■□□□□ 0.31
LRRTM4-204ENST00000409884 ERCC6Q03468 1493 aa16.96■□□□□ 0.3
LRRTM4-204ENST00000409884 KIF21BO75037 1637 aa16.95■□□□□ 0.3
LRRTM4-204ENST00000409884 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
LRRTM4-204ENST00000409884 RANGAP1P46060 587 aaPredicted RBP16.94■□□□□ 0.3
LRRTM4-204ENST00000409884 IGF1RP08069 1367 aa16.93■□□□□ 0.3
LRRTM4-204ENST00000409884 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
LRRTM4-204ENST00000409884 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
LRRTM4-204ENST00000409884 HRCP23327 699 aa16.92■□□□□ 0.3
LRRTM4-204ENST00000409884 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
LRRTM4-204ENST00000409884 ABCA10Q8WWZ4 1543 aa16.92■□□□□ 0.3
LRRTM4-204ENST00000409884 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
LRRTM4-204ENST00000409884 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
LRRTM4-204ENST00000409884 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
LRRTM4-204ENST00000409884 WDR62O43379 1518 aa16.84■□□□□ 0.29
LRRTM4-204ENST00000409884 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
LRRTM4-204ENST00000409884 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
LRRTM4-204ENST00000409884 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
LRRTM4-204ENST00000409884 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
LRRTM4-204ENST00000409884 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
LRRTM4-204ENST00000409884 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
LRRTM4-204ENST00000409884 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
LRRTM4-204ENST00000409884 GAPVD1Q14C86 1478 aa16.79■□□□□ 0.28
LRRTM4-204ENST00000409884 ERICH6Q7L0X2 663 aa16.77■□□□□ 0.27
LRRTM4-204ENST00000409884 CLIP1P30622 1438 aa16.76■□□□□ 0.27
LRRTM4-204ENST00000409884 APLP2Q06481 763 aa16.74■□□□□ 0.27
LRRTM4-204ENST00000409884 IFT140Q96RY7 1462 aa16.71■□□□□ 0.27
LRRTM4-204ENST00000409884 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
LRRTM4-204ENST00000409884 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
LRRTM4-204ENST00000409884 SLC24A1O60721 1099 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms