RNA–Protein interactions for RNA: ENST00000376110.7

LST1-211, leukocyte specific transcript 1, humanhuman

TSL 3 BASIC

Gene LST1, Length 433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-211ENST00000376110 NISCHQ9Y2I1 1504 aa20.56■□□□□ 0.88
LST1-211ENST00000376110 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
LST1-211ENST00000376110 ABCC9O60706 1549 aa20.32■□□□□ 0.84
LST1-211ENST00000376110 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
LST1-211ENST00000376110 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
LST1-211ENST00000376110 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
LST1-211ENST00000376110 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
LST1-211ENST00000376110 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
LST1-211ENST00000376110 NACADO15069 1562 aa18.33■□□□□ 0.52
LST1-211ENST00000376110 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
LST1-211ENST00000376110 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.51
LST1-211ENST00000376110 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
LST1-211ENST00000376110 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
LST1-211ENST00000376110 CUX2O14529 1486 aa18.13■□□□□ 0.49
LST1-211ENST00000376110 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
LST1-211ENST00000376110 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
LST1-211ENST00000376110 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
LST1-211ENST00000376110 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
LST1-211ENST00000376110 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
LST1-211ENST00000376110 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
LST1-211ENST00000376110 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
LST1-211ENST00000376110 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
LST1-211ENST00000376110 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
LST1-211ENST00000376110 ILDR1Q86SU0 546 aaPredicted RBP17.07■□□□□ 0.32
LST1-211ENST00000376110 NESP48681 1621 aa17.07■□□□□ 0.32
LST1-211ENST00000376110 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
LST1-211ENST00000376110 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
LST1-211ENST00000376110 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
LST1-211ENST00000376110 DCAF1Q9Y4B6 1507 aa16.95■□□□□ 0.3
LST1-211ENST00000376110 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
LST1-211ENST00000376110 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
LST1-211ENST00000376110 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
LST1-211ENST00000376110 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
LST1-211ENST00000376110 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
LST1-211ENST00000376110 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
LST1-211ENST00000376110 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
LST1-211ENST00000376110 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
LST1-211ENST00000376110 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
LST1-211ENST00000376110 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
LST1-211ENST00000376110 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
LST1-211ENST00000376110 HMGXB3Q12766 1538 aa16.68■□□□□ 0.26
LST1-211ENST00000376110 WDR62O43379 1518 aa16.65■□□□□ 0.26
LST1-211ENST00000376110 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
LST1-211ENST00000376110 ARAP1Q96P48 1450 aa16.52■□□□□ 0.23
LST1-211ENST00000376110 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
LST1-211ENST00000376110 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
LST1-211ENST00000376110 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
LST1-211ENST00000376110 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
LST1-211ENST00000376110 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
LST1-211ENST00000376110 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
LST1-211ENST00000376110 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
LST1-211ENST00000376110 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
LST1-211ENST00000376110 FBXO41Q8TF61 875 aa16.14■□□□□ 0.17
LST1-211ENST00000376110 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
LST1-211ENST00000376110 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
LST1-211ENST00000376110 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
LST1-211ENST00000376110 SOCS7O14512 581 aa16.08■□□□□ 0.16
LST1-211ENST00000376110 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
LST1-211ENST00000376110 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
LST1-211ENST00000376110 CHD1O14646 1710 aa15.99■□□□□ 0.15
LST1-211ENST00000376110 FBLN2P98095 1184 aa15.97■□□□□ 0.15
LST1-211ENST00000376110 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
LST1-211ENST00000376110 CFTRP13569 1480 aa15.91■□□□□ 0.14
LST1-211ENST00000376110 CLASP1Q7Z460 1538 aa15.9■□□□□ 0.14
LST1-211ENST00000376110 ILDR2Q71H61 639 aa15.9■□□□□ 0.14
LST1-211ENST00000376110 HECW2Q9P2P5 1572 aa15.88■□□□□ 0.13
LST1-211ENST00000376110 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
LST1-211ENST00000376110 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.12
LST1-211ENST00000376110 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
LST1-211ENST00000376110 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
LST1-211ENST00000376110 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
LST1-211ENST00000376110 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
LST1-211ENST00000376110 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
LST1-211ENST00000376110 DISP3Q9P2K9 1392 aa15.7■□□□□ 0.1
LST1-211ENST00000376110 ADGRL1O94910 1474 aa15.68■□□□□ 0.1
LST1-211ENST00000376110 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
LST1-211ENST00000376110 KDM6BO15054 1643 aa15.65■□□□□ 0.1
LST1-211ENST00000376110 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
LST1-211ENST00000376110 FAM69CQ0P6D2 419 aa15.64■□□□□ 0.09
LST1-211ENST00000376110 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
LST1-211ENST00000376110 ABCC10Q5T3U5 1492 aa15.6■□□□□ 0.09
LST1-211ENST00000376110 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
LST1-211ENST00000376110 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
LST1-211ENST00000376110 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
LST1-211ENST00000376110 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
LST1-211ENST00000376110 WIZO95785 1651 aa15.48■□□□□ 0.07
LST1-211ENST00000376110 POLA1P09884 1462 aaPredicted RBP15.46■□□□□ 0.06
LST1-211ENST00000376110 DIP2BQ9P265 1576 aa15.45■□□□□ 0.06
LST1-211ENST00000376110 PRDM2Q13029 1718 aa15.45■□□□□ 0.06
LST1-211ENST00000376110 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
LST1-211ENST00000376110 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
LST1-211ENST00000376110 MAPKBP1O60336 1514 aa15.41■□□□□ 0.06
LST1-211ENST00000376110 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
LST1-211ENST00000376110 SOGA1O94964 1423 aa15.38■□□□□ 0.05
LST1-211ENST00000376110 CEP170Q5SW79 1584 aa15.36■□□□□ 0.05
LST1-211ENST00000376110 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
LST1-211ENST00000376110 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
LST1-211ENST00000376110 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
LST1-211ENST00000376110 TSPOAP1O95153 1857 aa15.29■□□□□ 0.04
LST1-211ENST00000376110 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms