RNA–Protein interactions for RNA: ENST00000550035.1

AC025254.1-201, humanhuman

TSL 5 BASIC

Gene AC025254.1, Length 247 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025254.1-201ENST00000550035 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
AC025254.1-201ENST00000550035 CHIC1Q5VXU3 224 aa11.41□□□□□ -0.58
AC025254.1-201ENST00000550035 SENP3Q9H4L4 574 aaPredicted RBP10.25□□□□□ -0.77
AC025254.1-201ENST00000550035 PHF23Q9BUL5 403 aaPredicted RBP10.07□□□□□ -0.8
AC025254.1-201ENST00000550035 FOXD1Q16676 465 aa9.46□□□□□ -0.9
AC025254.1-201ENST00000550035 NISCHQ9Y2I1 1504 aa9.3□□□□□ -0.92
AC025254.1-201ENST00000550035 PLPPR3Q6T4P5 718 aa9.21□□□□□ -0.94
AC025254.1-201ENST00000550035 POTEDQ86YR6 584 aa8.96□□□□□ -0.98
AC025254.1-201ENST00000550035 MSH5O43196 834 aa8.94□□□□□ -0.98
AC025254.1-201ENST00000550035 PIAS4Q8N2W9 510 aaPredicted RBP8.93□□□□□ -0.98
AC025254.1-201ENST00000550035 ADRA2BP18089 450 aa8.86□□□□□ -0.99
AC025254.1-201ENST00000550035 PPP6R1Q9UPN7 881 aa8.84□□□□□ -0.99
AC025254.1-201ENST00000550035 ABCC9O60706 1549 aa8.56□□□□□ -1.04
AC025254.1-201ENST00000550035 CCDC180Q9P1Z9 1646 aa8.38□□□□□ -1.07
AC025254.1-201ENST00000550035 SCAF1Q9H7N4 1312 aaKnown RBP8.25□□□□□ -1.09
AC025254.1-201ENST00000550035 DNAJC5BQ9UF47 199 aa8.23□□□□□ -1.09
AC025254.1-201ENST00000550035 MAPK8IP2Q13387 824 aaPredicted RBP8.1□□□□□ -1.11
AC025254.1-201ENST00000550035 DMRT2Q9Y5R5 561 aa8.1□□□□□ -1.11
AC025254.1-201ENST00000550035 RB1CC1Q8TDY2 1594 aa8.09□□□□□ -1.11
AC025254.1-201ENST00000550035 PPP4R3CPQ6ZMV5 832 aa8.04□□□□□ -1.12
AC025254.1-201ENST00000550035 NACADO15069 1562 aa8.01□□□□□ -1.13
AC025254.1-201ENST00000550035 PABPN1Q86U42 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
AC025254.1-201ENST00000550035 DCAF8L2P0C7V8 631 aa7.93□□□□□ -1.14
AC025254.1-201ENST00000550035 CNKSR2Q8WXI2 1034 aa7.9□□□□□ -1.14
AC025254.1-201ENST00000550035 MYO15BQ96JP2 1530 aa7.88□□□□□ -1.15
AC025254.1-201ENST00000550035 DCAF8L1A6NGE4 600 aa7.85□□□□□ -1.15
AC025254.1-201ENST00000550035 NCBP3Q53F19 620 aaKnown RBP7.84□□□□□ -1.15
AC025254.1-201ENST00000550035 BICRAQ9NZM4 1560 aa7.84□□□□□ -1.15
AC025254.1-201ENST00000550035 UNC13AQ9UPW8 1703 aa7.81□□□□□ -1.16
AC025254.1-201ENST00000550035 HOXD11P31277 338 aaPredicted RBP7.81□□□□□ -1.16
AC025254.1-201ENST00000550035 RNF216Q9NWF9 866 aaPredicted RBP7.8□□□□□ -1.16
AC025254.1-201ENST00000550035 SHROOM4Q9ULL8 1493 aa7.78□□□□□ -1.16
AC025254.1-201ENST00000550035 CECR2Q9BXF3 1484 aa7.75□□□□□ -1.17
AC025254.1-201ENST00000550035 DNAJC5Q9H3Z4 198 aa7.74□□□□□ -1.17
AC025254.1-201ENST00000550035 CC2D2AQ9P2K1 1620 aa7.72□□□□□ -1.17
AC025254.1-201ENST00000550035 DCAF1Q9Y4B6 1507 aa7.69□□□□□ -1.18
AC025254.1-201ENST00000550035 EIF4G1Q04637 1599 aaKnown RBP7.67□□□□□ -1.18
AC025254.1-201ENST00000550035 ZCCHC6Q5VYS8 1495 aaKnown RBP7.65□□□□□ -1.18
AC025254.1-201ENST00000550035 NPM3O75607 178 aaKnown RBP7.62□□□□□ -1.19
AC025254.1-201ENST00000550035 CACNB1Q02641 598 aaPredicted RBP7.62□□□□□ -1.19
AC025254.1-201ENST00000550035 SCRIBQ14160 1630 aa7.6□□□□□ -1.19
AC025254.1-201ENST00000550035 RNF39Q9H2S5 420 aa7.56□□□□□ -1.2
AC025254.1-201ENST00000550035 KCNA4P22459 653 aa7.52□□□□□ -1.21
AC025254.1-201ENST00000550035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.52□□□□□ -1.21
AC025254.1-201ENST00000550035 C1QBPQ07021 282 aaKnown RBP7.5□□□□□ -1.21
AC025254.1-201ENST00000550035 CUX2O14529 1486 aa7.49□□□□□ -1.21
AC025254.1-201ENST00000550035 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
AC025254.1-201ENST00000550035 ERCC6Q03468 1493 aa7.42□□□□□ -1.22
AC025254.1-201ENST00000550035 ATAD2BQ9ULI0 1458 aa7.35□□□□□ -1.23
AC025254.1-201ENST00000550035 SMARCA2P51531 1590 aa7.31□□□□□ -1.24
AC025254.1-201ENST00000550035 HMGXB3Q12766 1538 aa7.31□□□□□ -1.24
AC025254.1-201ENST00000550035 NESP48681 1621 aa7.3□□□□□ -1.24
AC025254.1-201ENST00000550035 U3KPZ7 1027 aaPredicted RBP7.29□□□□□ -1.24
AC025254.1-201ENST00000550035 APLP2Q06481 763 aa7.26□□□□□ -1.25
AC025254.1-201ENST00000550035 TRIM41Q8WV44 630 aa7.26□□□□□ -1.25
AC025254.1-201ENST00000550035 BAZ1BQ9UIG0 1483 aaKnown RBP7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 SMARCA4P51532 1647 aa7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 PDS5BQ9NTI5 1447 aa7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 THOC2Q8NI27 1593 aaKnown RBP7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 LAMC3Q9Y6N6 1575 aa7.25□□□□□ -1.25
AC025254.1-201ENST00000550035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.23□□□□□ -1.25
AC025254.1-201ENST00000550035 CAPN15O75808 1086 aa7.23□□□□□ -1.25
AC025254.1-201ENST00000550035 HNRNPUL2Q1KMD3 747 aaKnown RBP7.23□□□□□ -1.25
AC025254.1-201ENST00000550035 PEG3Q9GZU2 1588 aa7.22□□□□□ -1.25
AC025254.1-201ENST00000550035 BAZ1AQ9NRL2 1556 aaPredicted RBP7.22□□□□□ -1.25
AC025254.1-201ENST00000550035 SLC4A2P04920 1241 aa7.22□□□□□ -1.25
AC025254.1-201ENST00000550035 CADPSQ9ULU8 1353 aa7.19□□□□□ -1.26
AC025254.1-201ENST00000550035 SAMD1Q6SPF0 538 aaPredicted RBP7.17□□□□□ -1.26
AC025254.1-201ENST00000550035 SLC4A1APQ9BWU0 796 aaKnown RBP7.17□□□□□ -1.26
AC025254.1-201ENST00000550035 OSCARQ8IYS5 282 aa7.16□□□□□ -1.26
AC025254.1-201ENST00000550035 SPINK5Q9NQ38 1064 aaPredicted RBP7.16□□□□□ -1.26
AC025254.1-201ENST00000550035 MRC2Q9UBG0 1479 aa7.16□□□□□ -1.26
AC025254.1-201ENST00000550035 WDR62O43379 1518 aa7.14□□□□□ -1.27
AC025254.1-201ENST00000550035 KIF21AQ7Z4S6 1674 aa7.14□□□□□ -1.27
AC025254.1-201ENST00000550035 MROH2BQ7Z745 1585 aa7.13□□□□□ -1.27
AC025254.1-201ENST00000550035 ZNF219Q9P2Y4 722 aaPredicted RBP7.13□□□□□ -1.27
AC025254.1-201ENST00000550035 MYCNP04198 464 aaPredicted RBP7.11□□□□□ -1.27
AC025254.1-201ENST00000550035 TRHP20396 242 aaPredicted RBP7.11□□□□□ -1.27
AC025254.1-201ENST00000550035 DSG3P32926 999 aa7.09□□□□□ -1.27
AC025254.1-201ENST00000550035 CEP164Q9UPV0 1460 aa7.09□□□□□ -1.27
AC025254.1-201ENST00000550035 FANCD2Q9BXW9 1451 aa7.07□□□□□ -1.28
AC025254.1-201ENST00000550035 FOXD4L1Q9NU39 408 aa7.06□□□□□ -1.28
AC025254.1-201ENST00000550035 CFTRP13569 1480 aa7.05□□□□□ -1.28
AC025254.1-201ENST00000550035 ABCB7O75027 752 aa7.03□□□□□ -1.28
AC025254.1-201ENST00000550035 URB2Q14146 1524 aaKnown RBP7.01□□□□□ -1.29
AC025254.1-201ENST00000550035 WIZO95785 1651 aa7□□□□□ -1.29
AC025254.1-201ENST00000550035 RIMBP3CA6NJZ7 1639 aa6.99□□□□□ -1.29
AC025254.1-201ENST00000550035 RIMBP3BA6NNM3 1639 aa6.99□□□□□ -1.29
AC025254.1-201ENST00000550035 RIMBP3Q9UFD9 1639 aa6.99□□□□□ -1.29
AC025254.1-201ENST00000550035 ARHGEF11O15085 1522 aa6.98□□□□□ -1.29
AC025254.1-201ENST00000550035 CYB5RLQ6IPT4 315 aa6.98□□□□□ -1.29
AC025254.1-201ENST00000550035 IFT140Q96RY7 1462 aa6.98□□□□□ -1.29
AC025254.1-201ENST00000550035 RSF1Q96T23 1441 aaPredicted RBP6.95□□□□□ -1.3
AC025254.1-201ENST00000550035 ZNF608Q9ULD9 1512 aaPredicted RBP6.95□□□□□ -1.3
AC025254.1-201ENST00000550035 POTEHQ6S545 545 aa6.94□□□□□ -1.3
AC025254.1-201ENST00000550035 TOP2AP11388 1531 aaKnown RBP6.94□□□□□ -1.3
AC025254.1-201ENST00000550035 ABCC8Q09428 1581 aa6.93□□□□□ -1.3
AC025254.1-201ENST00000550035 TOPBP1Q92547 1522 aa6.91□□□□□ -1.3
AC025254.1-201ENST00000550035 POLA2Q14181 598 aa6.91□□□□□ -1.3
AC025254.1-201ENST00000550035 ARAP1Q96P48 1450 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms