RNA–Protein interactions for RNA: ENST00000276410.6

CHRNA6-201, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA6, Length 2,400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-201ENST00000276410 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
CHRNA6-201ENST00000276410 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
CHRNA6-201ENST00000276410 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.36
CHRNA6-201ENST00000276410 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
CHRNA6-201ENST00000276410 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
CHRNA6-201ENST00000276410 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
CHRNA6-201ENST00000276410 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
CHRNA6-201ENST00000276410 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
CHRNA6-201ENST00000276410 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
CHRNA6-201ENST00000276410 HRCP23327 699 aa16.6■□□□□ 0.25
CHRNA6-201ENST00000276410 PCGF6Q9BYE7 350 aa16.52■□□□□ 0.24
CHRNA6-201ENST00000276410 PPARGC1BQ86YN6 1023 aaKnown RBP16.42■□□□□ 0.22
CHRNA6-201ENST00000276410 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
CHRNA6-201ENST00000276410 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
CHRNA6-201ENST00000276410 ABCC9O60706 1549 aa16.26■□□□□ 0.19
CHRNA6-201ENST00000276410 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
CHRNA6-201ENST00000276410 NACADO15069 1562 aa16.04■□□□□ 0.16
CHRNA6-201ENST00000276410 RB1CC1Q8TDY2 1594 aa16.01■□□□□ 0.15
CHRNA6-201ENST00000276410 TRIM26Q12899 539 aaPredicted RBP16■□□□□ 0.15
CHRNA6-201ENST00000276410 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.15
CHRNA6-201ENST00000276410 FAM9AQ8IZU1 332 aaPredicted RBP15.91■□□□□ 0.14
CHRNA6-201ENST00000276410 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
CHRNA6-201ENST00000276410 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
CHRNA6-201ENST00000276410 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
CHRNA6-201ENST00000276410 WIZO95785 1651 aa15.82■□□□□ 0.12
CHRNA6-201ENST00000276410 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
CHRNA6-201ENST00000276410 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
CHRNA6-201ENST00000276410 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
CHRNA6-201ENST00000276410 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
CHRNA6-201ENST00000276410 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
CHRNA6-201ENST00000276410 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
CHRNA6-201ENST00000276410 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
CHRNA6-201ENST00000276410 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
CHRNA6-201ENST00000276410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
CHRNA6-201ENST00000276410 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
CHRNA6-201ENST00000276410 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.06
CHRNA6-201ENST00000276410 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
CHRNA6-201ENST00000276410 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
CHRNA6-201ENST00000276410 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
CHRNA6-201ENST00000276410 CCER1Q8TC90 406 aaPredicted RBP15.37■□□□□ 0.05
CHRNA6-201ENST00000276410 SOGA1O94964 1423 aa15.27■□□□□ 0.04
CHRNA6-201ENST00000276410 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
CHRNA6-201ENST00000276410 RUSC2Q8N2Y8 1516 aa15.22■□□□□ 0.03
CHRNA6-201ENST00000276410 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
CHRNA6-201ENST00000276410 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.03
CHRNA6-201ENST00000276410 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
CHRNA6-201ENST00000276410 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
CHRNA6-201ENST00000276410 DIEXFQ68CQ4 756 aaKnown RBP15.18■□□□□ 0.02
CHRNA6-201ENST00000276410 ATAD2BQ9ULI0 1458 aa15.17■□□□□ 0.02
CHRNA6-201ENST00000276410 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
CHRNA6-201ENST00000276410 BAZ1BQ9UIG0 1483 aaKnown RBP15.15■□□□□ 0.02
CHRNA6-201ENST00000276410 UBTFP17480 764 aaKnown RBP15.13■□□□□ 0.01
CHRNA6-201ENST00000276410 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
CHRNA6-201ENST00000276410 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
CHRNA6-201ENST00000276410 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
CHRNA6-201ENST00000276410 TNIKQ9UKE5 1360 aa15.08■□□□□ 0
CHRNA6-201ENST00000276410 EEA1Q15075 1411 aa15.07■□□□□ 0
CHRNA6-201ENST00000276410 GOLGA3Q08378 1498 aa15.03■□□□□ -0
CHRNA6-201ENST00000276410 CENPBP07199 599 aaPredicted RBP15.01□□□□□ -0.01
CHRNA6-201ENST00000276410 YTHDC1Q96MU7 727 aaKnown RBP14.99□□□□□ -0.01
CHRNA6-201ENST00000276410 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
CHRNA6-201ENST00000276410 RANGAP1P46060 587 aaPredicted RBP14.97□□□□□ -0.01
CHRNA6-201ENST00000276410 ZNF316A6NFI3 1004 aaPredicted RBP14.97□□□□□ -0.01
CHRNA6-201ENST00000276410 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
CHRNA6-201ENST00000276410 KIF21BO75037 1637 aa14.91□□□□□ -0.02
CHRNA6-201ENST00000276410 RAPGEF2Q9Y4G8 1499 aa14.9□□□□□ -0.02
CHRNA6-201ENST00000276410 MIER1Q8N108 512 aa14.89□□□□□ -0.03
CHRNA6-201ENST00000276410 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
CHRNA6-201ENST00000276410 CLIP1P30622 1438 aa14.88□□□□□ -0.03
CHRNA6-201ENST00000276410 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
CHRNA6-201ENST00000276410 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
CHRNA6-201ENST00000276410 BIVM-ERCC5R4GMW8 1640 aa14.82□□□□□ -0.04
CHRNA6-201ENST00000276410 VPS8Q8N3P4 1428 aa14.79□□□□□ -0.04
CHRNA6-201ENST00000276410 CUX1P39880 1505 aa14.78□□□□□ -0.04
CHRNA6-201ENST00000276410 APLP2Q06481 763 aa14.74□□□□□ -0.05
CHRNA6-201ENST00000276410 CFTRP13569 1480 aa14.73□□□□□ -0.05
CHRNA6-201ENST00000276410 PRXQ9BXM0 1461 aa14.7□□□□□ -0.06
CHRNA6-201ENST00000276410 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
CHRNA6-201ENST00000276410 KIF27Q86VH2 1401 aa14.67□□□□□ -0.06
CHRNA6-201ENST00000276410 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
CHRNA6-201ENST00000276410 KANK4Q5T7N3 995 aaPredicted RBP14.64□□□□□ -0.07
CHRNA6-201ENST00000276410 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
CHRNA6-201ENST00000276410 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
CHRNA6-201ENST00000276410 CUX2O14529 1486 aa14.6□□□□□ -0.07
CHRNA6-201ENST00000276410 CC2D2AQ9P2K1 1620 aa14.6□□□□□ -0.07
CHRNA6-201ENST00000276410 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
CHRNA6-201ENST00000276410 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
CHRNA6-201ENST00000276410 ARHGAP35Q9NRY4 1499 aa14.53□□□□□ -0.08
CHRNA6-201ENST00000276410 ITGAEP38570 1179 aa14.53□□□□□ -0.08
CHRNA6-201ENST00000276410 IGF1RP08069 1367 aa14.51□□□□□ -0.09
CHRNA6-201ENST00000276410 FANCD2Q9BXW9 1451 aa14.48□□□□□ -0.09
CHRNA6-201ENST00000276410 SUPT16HQ9Y5B9 1047 aaKnown RBP14.47□□□□□ -0.09
CHRNA6-201ENST00000276410 NESP48681 1621 aa14.47□□□□□ -0.09
CHRNA6-201ENST00000276410 CLSPNQ9HAW4 1339 aa14.47□□□□□ -0.09
CHRNA6-201ENST00000276410 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
CHRNA6-201ENST00000276410 KCNH8Q96L42 1107 aa14.46□□□□□ -0.09
CHRNA6-201ENST00000276410 RRBP1Q9P2E9 1410 aaKnown RBP14.46□□□□□ -0.1
CHRNA6-201ENST00000276410 RAD54L2Q9Y4B4 1467 aa14.44□□□□□ -0.1
CHRNA6-201ENST00000276410 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
CHRNA6-201ENST00000276410 CCNB3Q8WWL7 1395 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms