Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM42Q8IWZ5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 PHGDH-210ENST00000641115 1638 ntBASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM42Q8IWZ5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 AL591742.1-201ENST00000604433 565 ntBASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM42Q8IWZ5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM42Q8IWZ5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM42Q8IWZ5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.39■□□□□ 0.7
TRIM42Q8IWZ5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM42Q8IWZ5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TRIM42Q8IWZ5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM42Q8IWZ5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.39■□□□□ 0.7
TRIM42Q8IWZ5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM42Q8IWZ5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM42Q8IWZ5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM42Q8IWZ5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM42Q8IWZ5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM42Q8IWZ5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM42Q8IWZ5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM42Q8IWZ5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms