Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MIR2861-201ENST00000636310 90 ntBASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CROCCP3Q8IVE0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 OR6D1P-202ENST00000641007 5290 ntBASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CROCCP3Q8IVE0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 UNC93B8-201ENST00000511903 705 ntBASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CROCCP3Q8IVE0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CROCCP3Q8IVE0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CROCCP3Q8IVE0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CROCCP3Q8IVE0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 AC053503.5-201ENST00000601508 636 ntBASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 AC084018.2-201ENST00000613093 2607 ntBASIC17.64■□□□□ 0.41
CROCCP3Q8IVE0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms