Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PDE6CP51160 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PDE6CP51160 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.06■□□□□ 0.96
PDE6CP51160 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6CP51160 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6CP51160 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.06■□□□□ 0.96
PDE6CP51160 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6CP51160 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6CP51160 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.06■□□□□ 0.96
PDE6CP51160 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6CP51160 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6CP51160 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.06■□□□□ 0.96
PDE6CP51160 AC006557.6-201ENST00000623071 864 ntBASIC21.06■□□□□ 0.96
PDE6CP51160 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.06■□□□□ 0.96
PDE6CP51160 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6CP51160 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PDE6CP51160 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6CP51160 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6CP51160 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6CP51160 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6CP51160 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6CP51160 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.06■□□□□ 0.96
PDE6CP51160 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.05■□□□□ 0.96
PDE6CP51160 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PDE6CP51160 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PDE6CP51160 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.05■□□□□ 0.96
PDE6CP51160 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.05■□□□□ 0.96
PDE6CP51160 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.05■□□□□ 0.96
PDE6CP51160 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.05■□□□□ 0.96
PDE6CP51160 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.05■□□□□ 0.96
PDE6CP51160 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.05■□□□□ 0.96
PDE6CP51160 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.05■□□□□ 0.96
PDE6CP51160 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PDE6CP51160 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.05■□□□□ 0.96
PDE6CP51160 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.05■□□□□ 0.96
PDE6CP51160 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.05■□□□□ 0.96
PDE6CP51160 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.05■□□□□ 0.96
PDE6CP51160 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PDE6CP51160 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6CP51160 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PDE6CP51160 AC116562.4-201ENST00000641316 2276 ntBASIC21.04■□□□□ 0.96
PDE6CP51160 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6CP51160 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6CP51160 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PDE6CP51160 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6CP51160 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PDE6CP51160 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.04■□□□□ 0.96
PDE6CP51160 AC008550.1-201ENST00000511500 884 ntBASIC21.04■□□□□ 0.96
PDE6CP51160 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.04■□□□□ 0.96
PDE6CP51160 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.04■□□□□ 0.96
PDE6CP51160 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.04■□□□□ 0.96
PDE6CP51160 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.04■□□□□ 0.96
PDE6CP51160 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.04■□□□□ 0.96
PDE6CP51160 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.04■□□□□ 0.96
PDE6CP51160 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6CP51160 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
PDE6CP51160 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6CP51160 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6CP51160 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6CP51160 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6CP51160 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6CP51160 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.03■□□□□ 0.96
PDE6CP51160 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6CP51160 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.03■□□□□ 0.96
PDE6CP51160 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.03■□□□□ 0.96
PDE6CP51160 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.03■□□□□ 0.96
PDE6CP51160 AC233263.1-201ENST00000578059 224 ntBASIC21.03■□□□□ 0.96
PDE6CP51160 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6CP51160 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
PDE6CP51160 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6CP51160 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PDE6CP51160 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PDE6CP51160 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.02■□□□□ 0.96
PDE6CP51160 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PDE6CP51160 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
PDE6CP51160 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.02■□□□□ 0.96
PDE6CP51160 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PDE6CP51160 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms