Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 AC091799.1-201ENST00000422823 811 ntBASIC18.82■□□□□ 0.6
LINGO3P0C6S8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 CROCCP3-202ENST00000420820 1947 ntBASIC18.82■□□□□ 0.6
LINGO3P0C6S8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 AC013268.1-206ENST00000638368 961 ntBASIC18.81■□□□□ 0.6
LINGO3P0C6S8 AC112229.1-201ENST00000639295 961 ntBASIC18.81■□□□□ 0.6
LINGO3P0C6S8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINGO3P0C6S8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 CNN2P6-201ENST00000439038 900 ntBASIC18.8■□□□□ 0.6
LINGO3P0C6S8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 AC007322.4-201ENST00000509611 723 ntBASIC18.8■□□□□ 0.6
LINGO3P0C6S8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 AC080038.1-201ENST00000611274 1154 ntBASIC18.8■□□□□ 0.6
LINGO3P0C6S8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LINGO3P0C6S8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 TREX1-205ENST00000625293 1783 ntBASIC18.79■□□□□ 0.6
LINGO3P0C6S8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINGO3P0C6S8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms