Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TNFRSF11AQ9Y6Q6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.68
TNFRSF11AQ9Y6Q6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
TNFRSF11AQ9Y6Q6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TNFRSF11AQ9Y6Q6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TNFRSF11AQ9Y6Q6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.76■■■□□ 2.67
TNFRSF11AQ9Y6Q6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.76■■■□□ 2.67
TNFRSF11AQ9Y6Q6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
TNFRSF11AQ9Y6Q6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
TNFRSF11AQ9Y6Q6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TNFRSF11AQ9Y6Q6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.75■■■□□ 2.67
TNFRSF11AQ9Y6Q6 AC016575.1-201ENST00000607026 382 ntBASIC31.75■■■□□ 2.67
TNFRSF11AQ9Y6Q6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.75■■■□□ 2.67
TNFRSF11AQ9Y6Q6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.75■■■□□ 2.67
TNFRSF11AQ9Y6Q6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
TNFRSF11AQ9Y6Q6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.74■■■□□ 2.67
TNFRSF11AQ9Y6Q6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.74■■■□□ 2.67
TNFRSF11AQ9Y6Q6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.74■■■□□ 2.67
TNFRSF11AQ9Y6Q6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.74■■■□□ 2.67
TNFRSF11AQ9Y6Q6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.74■■■□□ 2.67
TNFRSF11AQ9Y6Q6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L13-201ENST00000554103 1267 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L15-201ENST00000611059 1267 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L23-201ENST00000615195 1269 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L24-201ENST00000617576 1269 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L22-201ENST00000618238 1269 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L20-201ENST00000619712 1269 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L21-201ENST00000622058 1269 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L10-201ENST00000622460 1267 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 DUX4L25-201ENST00000624915 1269 ntBASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.73■■■□□ 2.67
TNFRSF11AQ9Y6Q6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TNFRSF11AQ9Y6Q6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
TNFRSF11AQ9Y6Q6 ABCB10P3-201ENST00000561950 2166 ntBASIC31.72■■■□□ 2.67
TNFRSF11AQ9Y6Q6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
TNFRSF11AQ9Y6Q6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.7■■■□□ 2.67
TNFRSF11AQ9Y6Q6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
TNFRSF11AQ9Y6Q6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
TNFRSF11AQ9Y6Q6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.69■■■□□ 2.66
TNFRSF11AQ9Y6Q6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.69■■■□□ 2.66
TNFRSF11AQ9Y6Q6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TNFRSF11AQ9Y6Q6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TNFRSF11AQ9Y6Q6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.67■■■□□ 2.66
TNFRSF11AQ9Y6Q6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.67■■■□□ 2.66
TNFRSF11AQ9Y6Q6 AC100797.4-201ENST00000631653 1827 ntBASIC31.66■■■□□ 2.66
TNFRSF11AQ9Y6Q6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TNFRSF11AQ9Y6Q6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.66■■■□□ 2.66
TNFRSF11AQ9Y6Q6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
TNFRSF11AQ9Y6Q6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TNFRSF11AQ9Y6Q6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TNFRSF11AQ9Y6Q6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.65■■■□□ 2.66
TNFRSF11AQ9Y6Q6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
TNFRSF11AQ9Y6Q6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
TNFRSF11AQ9Y6Q6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TNFRSF11AQ9Y6Q6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TNFRSF11AQ9Y6Q6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
TNFRSF11AQ9Y6Q6 HLA-V-202ENST00000446817 847 ntBASIC31.64■■■□□ 2.66
TNFRSF11AQ9Y6Q6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.63■■■□□ 2.65
TNFRSF11AQ9Y6Q6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.63■■■□□ 2.65
TNFRSF11AQ9Y6Q6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TNFRSF11AQ9Y6Q6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TNFRSF11AQ9Y6Q6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TNFRSF11AQ9Y6Q6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.62■■■□□ 2.65
TNFRSF11AQ9Y6Q6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
TNFRSF11AQ9Y6Q6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.62■■■□□ 2.65
TNFRSF11AQ9Y6Q6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TNFRSF11AQ9Y6Q6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.61■■■□□ 2.65
TNFRSF11AQ9Y6Q6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.61■■■□□ 2.65
TNFRSF11AQ9Y6Q6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.6■■■□□ 2.65
TNFRSF11AQ9Y6Q6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TNFRSF11AQ9Y6Q6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TNFRSF11AQ9Y6Q6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
TNFRSF11AQ9Y6Q6 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.59■■■□□ 2.65
TNFRSF11AQ9Y6Q6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.58■■■□□ 2.65
TNFRSF11AQ9Y6Q6 AP004833.2-201ENST00000532228 1454 ntBASIC31.58■■■□□ 2.65
TNFRSF11AQ9Y6Q6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
TNFRSF11AQ9Y6Q6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
TNFRSF11AQ9Y6Q6 MIR639-201ENST00000384974 98 ntBASIC31.57■■■□□ 2.64
TNFRSF11AQ9Y6Q6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.57■■■□□ 2.64
TNFRSF11AQ9Y6Q6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TNFRSF11AQ9Y6Q6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.56■■■□□ 2.64
TNFRSF11AQ9Y6Q6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TNFRSF11AQ9Y6Q6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.56■■■□□ 2.64
TNFRSF11AQ9Y6Q6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.56■■■□□ 2.64
TNFRSF11AQ9Y6Q6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.56■■■□□ 2.64
TNFRSF11AQ9Y6Q6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TNFRSF11AQ9Y6Q6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
TNFRSF11AQ9Y6Q6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TNFRSF11AQ9Y6Q6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TNFRSF11AQ9Y6Q6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
TNFRSF11AQ9Y6Q6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TNFRSF11AQ9Y6Q6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TNFRSF11AQ9Y6Q6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TNFRSF11AQ9Y6Q6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.53■■■□□ 2.64
TNFRSF11AQ9Y6Q6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
TNFRSF11AQ9Y6Q6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.53■■■□□ 2.64
TNFRSF11AQ9Y6Q6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms