Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDHGB1Q9Y5G3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.39■■□□□ 1.34
PCDHGB1Q9Y5G3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHGB1Q9Y5G3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGB1Q9Y5G3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB1Q9Y5G3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PCDHGB1Q9Y5G3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGB1Q9Y5G3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDHGB1Q9Y5G3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHGB1Q9Y5G3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGB1Q9Y5G3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PCDHGB1Q9Y5G3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB1Q9Y5G3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB1Q9Y5G3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB1Q9Y5G3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB1Q9Y5G3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB1Q9Y5G3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB1Q9Y5G3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGB1Q9Y5G3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PCDHGB1Q9Y5G3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB1Q9Y5G3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB1Q9Y5G3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB1Q9Y5G3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB1Q9Y5G3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHGB1Q9Y5G3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.33■■□□□ 1.33
PCDHGB1Q9Y5G3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGB1Q9Y5G3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGB1Q9Y5G3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGB1Q9Y5G3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGB1Q9Y5G3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGB1Q9Y5G3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGB1Q9Y5G3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHGB1Q9Y5G3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGB1Q9Y5G3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGB1Q9Y5G3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGB1Q9Y5G3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGB1Q9Y5G3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
PCDHGB1Q9Y5G3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGB1Q9Y5G3 LINC01003-201ENST00000564834 1764 ntBASIC23.29■■□□□ 1.32
PCDHGB1Q9Y5G3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PCDHGB1Q9Y5G3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHGB1Q9Y5G3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB1Q9Y5G3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB1Q9Y5G3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGB1Q9Y5G3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB1Q9Y5G3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB1Q9Y5G3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGB1Q9Y5G3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDHGB1Q9Y5G3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB1Q9Y5G3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB1Q9Y5G3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB1Q9Y5G3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB1Q9Y5G3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB1Q9Y5G3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB1Q9Y5G3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB1Q9Y5G3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB1Q9Y5G3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGB1Q9Y5G3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB1Q9Y5G3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB1Q9Y5G3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGB1Q9Y5G3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB1Q9Y5G3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PCDHGB1Q9Y5G3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHGB1Q9Y5G3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB1Q9Y5G3 AC091060.1-201ENST00000623524 1766 ntBASIC23.24■■□□□ 1.31
PCDHGB1Q9Y5G3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGB1Q9Y5G3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGB1Q9Y5G3 AC010864.1-201ENST00000609407 1511 ntBASIC23.23■■□□□ 1.31
PCDHGB1Q9Y5G3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PCDHGB1Q9Y5G3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGB1Q9Y5G3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGB1Q9Y5G3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGB1Q9Y5G3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGB1Q9Y5G3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDHGB1Q9Y5G3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGB1Q9Y5G3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGB1Q9Y5G3 AP004833.2-201ENST00000532228 1454 ntBASIC23.22■■□□□ 1.31
PCDHGB1Q9Y5G3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGB1Q9Y5G3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHGB1Q9Y5G3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB1Q9Y5G3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDHGB1Q9Y5G3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
PCDHGB1Q9Y5G3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGB1Q9Y5G3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PCDHGB1Q9Y5G3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGB1Q9Y5G3 AL133380.1-201ENST00000506013 324 ntBASIC23.18■■□□□ 1.3
PCDHGB1Q9Y5G3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGB1Q9Y5G3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB1Q9Y5G3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB1Q9Y5G3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.18■■□□□ 1.3
PCDHGB1Q9Y5G3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGB1Q9Y5G3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB1Q9Y5G3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHGB1Q9Y5G3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGB1Q9Y5G3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGB1Q9Y5G3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHGB1Q9Y5G3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDHGB1Q9Y5G3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHGB1Q9Y5G3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PCDHGB1Q9Y5G3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms