Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM5Q9Y4Y9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM5Q9Y4Y9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LSM5Q9Y4Y9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LSM5Q9Y4Y9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.03■□□□□ 0.96
LSM5Q9Y4Y9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM5Q9Y4Y9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM5Q9Y4Y9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM5Q9Y4Y9 DYNLL1-208ENST00000550178 581 ntBASIC21.02■□□□□ 0.96
LSM5Q9Y4Y9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.02■□□□□ 0.96
LSM5Q9Y4Y9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.02■□□□□ 0.95
LSM5Q9Y4Y9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LSM5Q9Y4Y9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LSM5Q9Y4Y9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM5Q9Y4Y9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.01■□□□□ 0.95
LSM5Q9Y4Y9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM5Q9Y4Y9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LSM5Q9Y4Y9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LSM5Q9Y4Y9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM5Q9Y4Y9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 AC010864.1-201ENST00000609407 1511 ntBASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM5Q9Y4Y9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM5Q9Y4Y9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.98■□□□□ 0.95
LSM5Q9Y4Y9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM5Q9Y4Y9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSM5Q9Y4Y9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.98■□□□□ 0.95
LSM5Q9Y4Y9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM5Q9Y4Y9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM5Q9Y4Y9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LSM5Q9Y4Y9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSM5Q9Y4Y9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.96■□□□□ 0.95
LSM5Q9Y4Y9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.96■□□□□ 0.95
LSM5Q9Y4Y9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.96■□□□□ 0.95
LSM5Q9Y4Y9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LSM5Q9Y4Y9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
LSM5Q9Y4Y9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM5Q9Y4Y9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.95■□□□□ 0.94
LSM5Q9Y4Y9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM5Q9Y4Y9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
LSM5Q9Y4Y9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LSM5Q9Y4Y9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM5Q9Y4Y9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LSM5Q9Y4Y9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LSM5Q9Y4Y9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM5Q9Y4Y9 LINC01003-201ENST00000564834 1764 ntBASIC20.92■□□□□ 0.94
LSM5Q9Y4Y9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM5Q9Y4Y9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.92■□□□□ 0.94
LSM5Q9Y4Y9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM5Q9Y4Y9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM5Q9Y4Y9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM5Q9Y4Y9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSM5Q9Y4Y9 WASH5P-204ENST00000632292 975 ntBASIC20.91■□□□□ 0.94
LSM5Q9Y4Y9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM5Q9Y4Y9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM5Q9Y4Y9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LSM5Q9Y4Y9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM5Q9Y4Y9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM5Q9Y4Y9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LSM5Q9Y4Y9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM5Q9Y4Y9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM5Q9Y4Y9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.89■□□□□ 0.93
LSM5Q9Y4Y9 ZNRF2P1-201ENST00000441407 443 ntBASIC20.88■□□□□ 0.93
LSM5Q9Y4Y9 AL031258.1-201ENST00000623562 325 ntBASIC20.88■□□□□ 0.93
LSM5Q9Y4Y9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM5Q9Y4Y9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LSM5Q9Y4Y9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM5Q9Y4Y9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM5Q9Y4Y9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.86■□□□□ 0.93
LSM5Q9Y4Y9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LSM5Q9Y4Y9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM5Q9Y4Y9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LSM5Q9Y4Y9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM5Q9Y4Y9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM5Q9Y4Y9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.85■□□□□ 0.93
LSM5Q9Y4Y9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.84■□□□□ 0.93
LSM5Q9Y4Y9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.84■□□□□ 0.93
LSM5Q9Y4Y9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.84■□□□□ 0.93
LSM5Q9Y4Y9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM5Q9Y4Y9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM5Q9Y4Y9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSM5Q9Y4Y9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM5Q9Y4Y9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSM5Q9Y4Y9 AP004833.2-201ENST00000532228 1454 ntBASIC20.83■□□□□ 0.93
LSM5Q9Y4Y9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSM5Q9Y4Y9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.83■□□□□ 0.92
LSM5Q9Y4Y9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM5Q9Y4Y9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM5Q9Y4Y9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM5Q9Y4Y9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM5Q9Y4Y9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM5Q9Y4Y9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.81■□□□□ 0.92
LSM5Q9Y4Y9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms