Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CNOT6Q9ULM6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
CNOT6Q9ULM6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CNOT6Q9ULM6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CNOT6Q9ULM6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CNOT6Q9ULM6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CNOT6Q9ULM6 AC135983.2-203ENST00000454486 1613 ntBASIC25.62■■□□□ 1.69
CNOT6Q9ULM6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CNOT6Q9ULM6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CNOT6Q9ULM6 DUX4L11-201ENST00000611504 1267 ntBASIC25.61■■□□□ 1.69
CNOT6Q9ULM6 DUX4L12-201ENST00000614593 1267 ntBASIC25.61■■□□□ 1.69
CNOT6Q9ULM6 DUX4L14-201ENST00000621227 1267 ntBASIC25.61■■□□□ 1.69
CNOT6Q9ULM6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CNOT6Q9ULM6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CNOT6Q9ULM6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CNOT6Q9ULM6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CNOT6Q9ULM6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CNOT6Q9ULM6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CNOT6Q9ULM6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CNOT6Q9ULM6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CNOT6Q9ULM6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.58■■□□□ 1.69
CNOT6Q9ULM6 WHAMMP2-203ENST00000563942 1603 ntBASIC25.58■■□□□ 1.69
CNOT6Q9ULM6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.58■■□□□ 1.69
CNOT6Q9ULM6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.58■■□□□ 1.69
CNOT6Q9ULM6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
CNOT6Q9ULM6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CNOT6Q9ULM6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CNOT6Q9ULM6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.56■■□□□ 1.68
CNOT6Q9ULM6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CNOT6Q9ULM6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CNOT6Q9ULM6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.55■■□□□ 1.68
CNOT6Q9ULM6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.55■■□□□ 1.68
CNOT6Q9ULM6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CNOT6Q9ULM6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CNOT6Q9ULM6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CNOT6Q9ULM6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
CNOT6Q9ULM6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CNOT6Q9ULM6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CNOT6Q9ULM6 AL139393.2-201ENST00000608721 2025 ntBASIC25.53■■□□□ 1.68
CNOT6Q9ULM6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
CNOT6Q9ULM6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.52■■□□□ 1.68
CNOT6Q9ULM6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.52■■□□□ 1.68
CNOT6Q9ULM6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.52■■□□□ 1.68
CNOT6Q9ULM6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.52■■□□□ 1.68
CNOT6Q9ULM6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.52■■□□□ 1.68
CNOT6Q9ULM6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.52■■□□□ 1.68
CNOT6Q9ULM6 DUX4L13-201ENST00000554103 1267 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 MIR3648-2-201ENST00000581792 180 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 DUX4L15-201ENST00000611059 1267 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 DUX4L23-201ENST00000615195 1269 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 MIR3648-1-201ENST00000615959 180 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 DUX4L24-201ENST00000617576 1269 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 DUX4L22-201ENST00000618238 1269 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 DUX4L20-201ENST00000619712 1269 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 DUX4L21-201ENST00000622058 1269 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 DUX4L10-201ENST00000622460 1267 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 DUX4L25-201ENST00000624915 1269 ntBASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CNOT6Q9ULM6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CNOT6Q9ULM6 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.5■■□□□ 1.67
CNOT6Q9ULM6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CNOT6Q9ULM6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CNOT6Q9ULM6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.49■■□□□ 1.67
CNOT6Q9ULM6 CR559946.2-201ENST00000623684 991 ntBASIC25.49■■□□□ 1.67
CNOT6Q9ULM6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CNOT6Q9ULM6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CNOT6Q9ULM6 AP004833.2-201ENST00000532228 1454 ntBASIC25.48■■□□□ 1.67
CNOT6Q9ULM6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CNOT6Q9ULM6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CNOT6Q9ULM6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.48■■□□□ 1.67
CNOT6Q9ULM6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CNOT6Q9ULM6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.47■■□□□ 1.67
CNOT6Q9ULM6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CNOT6Q9ULM6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.46■■□□□ 1.67
CNOT6Q9ULM6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
CNOT6Q9ULM6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CNOT6Q9ULM6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CNOT6Q9ULM6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CNOT6Q9ULM6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CNOT6Q9ULM6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CNOT6Q9ULM6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CNOT6Q9ULM6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CNOT6Q9ULM6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CNOT6Q9ULM6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.44■■□□□ 1.66
CNOT6Q9ULM6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.44■■□□□ 1.66
CNOT6Q9ULM6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.44■■□□□ 1.66
CNOT6Q9ULM6 AC016575.1-201ENST00000607026 382 ntBASIC25.44■■□□□ 1.66
CNOT6Q9ULM6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CNOT6Q9ULM6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CNOT6Q9ULM6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CNOT6Q9ULM6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CNOT6Q9ULM6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.43■■□□□ 1.66
CNOT6Q9ULM6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CNOT6Q9ULM6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.43■■□□□ 1.66
CNOT6Q9ULM6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.43■■□□□ 1.66
CNOT6Q9ULM6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.43■■□□□ 1.66
CNOT6Q9ULM6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CNOT6Q9ULM6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.42■■□□□ 1.66
CNOT6Q9ULM6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.42■■□□□ 1.66
CNOT6Q9ULM6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms