Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SH2D4AQ9H788 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.17■■■□□ 2.42
SH2D4AQ9H788 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SH2D4AQ9H788 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SH2D4AQ9H788 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.16■■■□□ 2.42
SH2D4AQ9H788 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SH2D4AQ9H788 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.14■■■□□ 2.42
SH2D4AQ9H788 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.13■■■□□ 2.41
SH2D4AQ9H788 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
SH2D4AQ9H788 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
SH2D4AQ9H788 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.13■■■□□ 2.41
SH2D4AQ9H788 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
SH2D4AQ9H788 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
SH2D4AQ9H788 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.12■■■□□ 2.41
SH2D4AQ9H788 AC008813.1-201ENST00000536597 885 ntBASIC30.12■■■□□ 2.41
SH2D4AQ9H788 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.12■■■□□ 2.41
SH2D4AQ9H788 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
SH2D4AQ9H788 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SH2D4AQ9H788 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.1■■■□□ 2.41
SH2D4AQ9H788 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SH2D4AQ9H788 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
SH2D4AQ9H788 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.08■■■□□ 2.41
SH2D4AQ9H788 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SH2D4AQ9H788 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SH2D4AQ9H788 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SH2D4AQ9H788 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.08■■■□□ 2.41
SH2D4AQ9H788 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SH2D4AQ9H788 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SH2D4AQ9H788 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.07■■■□□ 2.4
SH2D4AQ9H788 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SH2D4AQ9H788 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.06■■■□□ 2.4
SH2D4AQ9H788 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.06■■■□□ 2.4
SH2D4AQ9H788 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
SH2D4AQ9H788 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.05■■■□□ 2.4
SH2D4AQ9H788 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.04■■■□□ 2.4
SH2D4AQ9H788 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SH2D4AQ9H788 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.04■■■□□ 2.4
SH2D4AQ9H788 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.03■■■□□ 2.4
SH2D4AQ9H788 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SH2D4AQ9H788 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SH2D4AQ9H788 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SH2D4AQ9H788 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SH2D4AQ9H788 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.02■■■□□ 2.4
SH2D4AQ9H788 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SH2D4AQ9H788 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SH2D4AQ9H788 AC110285.7-201ENST00000624417 1536 ntBASIC30.01■■■□□ 2.4
SH2D4AQ9H788 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SH2D4AQ9H788 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SH2D4AQ9H788 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SH2D4AQ9H788 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
SH2D4AQ9H788 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SH2D4AQ9H788 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SH2D4AQ9H788 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
SH2D4AQ9H788 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
SH2D4AQ9H788 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SH2D4AQ9H788 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.98■■■□□ 2.39
SH2D4AQ9H788 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SH2D4AQ9H788 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SH2D4AQ9H788 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
SH2D4AQ9H788 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.97■■■□□ 2.39
SH2D4AQ9H788 ST7-AS1-201ENST00000456775 1889 ntBASIC29.96■■■□□ 2.39
SH2D4AQ9H788 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SH2D4AQ9H788 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
SH2D4AQ9H788 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SH2D4AQ9H788 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SH2D4AQ9H788 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SH2D4AQ9H788 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.95■■■□□ 2.39
SH2D4AQ9H788 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SH2D4AQ9H788 GPX1-201ENST00000419349 1106 ntBASIC29.95■■■□□ 2.39
SH2D4AQ9H788 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
SH2D4AQ9H788 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.95■■■□□ 2.38
SH2D4AQ9H788 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SH2D4AQ9H788 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
SH2D4AQ9H788 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
SH2D4AQ9H788 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
SH2D4AQ9H788 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.93■■■□□ 2.38
SH2D4AQ9H788 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SH2D4AQ9H788 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
SH2D4AQ9H788 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.93■■■□□ 2.38
SH2D4AQ9H788 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
SH2D4AQ9H788 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.91■■■□□ 2.38
SH2D4AQ9H788 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.91■■■□□ 2.38
SH2D4AQ9H788 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SH2D4AQ9H788 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SH2D4AQ9H788 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.91■■■□□ 2.38
SH2D4AQ9H788 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.91■■■□□ 2.38
SH2D4AQ9H788 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SH2D4AQ9H788 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SH2D4AQ9H788 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
SH2D4AQ9H788 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SH2D4AQ9H788 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SH2D4AQ9H788 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.9■■■□□ 2.38
SH2D4AQ9H788 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.9■■■□□ 2.38
SH2D4AQ9H788 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.9■■■□□ 2.38
SH2D4AQ9H788 RARRES2P2-201ENST00000394842 485 ntBASIC29.89■■■□□ 2.38
SH2D4AQ9H788 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SH2D4AQ9H788 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.89■■■□□ 2.38
SH2D4AQ9H788 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SH2D4AQ9H788 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
SH2D4AQ9H788 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms