Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 AP002365.1-201ENST00000603448 772 ntBASIC21.31■■□□□ 1
RTBDNQ9BSG5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RTBDNQ9BSG5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RTBDNQ9BSG5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTBDNQ9BSG5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
RTBDNQ9BSG5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RTBDNQ9BSG5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RTBDNQ9BSG5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTBDNQ9BSG5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
RTBDNQ9BSG5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTBDNQ9BSG5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.29■■□□□ 1
RTBDNQ9BSG5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTBDNQ9BSG5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RTBDNQ9BSG5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RTBDNQ9BSG5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.27■■□□□ 1
RTBDNQ9BSG5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RTBDNQ9BSG5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
RTBDNQ9BSG5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTBDNQ9BSG5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTBDNQ9BSG5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTBDNQ9BSG5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTBDNQ9BSG5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTBDNQ9BSG5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTBDNQ9BSG5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTBDNQ9BSG5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.24■□□□□ 0.99
RTBDNQ9BSG5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTBDNQ9BSG5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.24■□□□□ 0.99
RTBDNQ9BSG5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.24■□□□□ 0.99
RTBDNQ9BSG5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTBDNQ9BSG5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTBDNQ9BSG5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTBDNQ9BSG5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTBDNQ9BSG5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTBDNQ9BSG5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTBDNQ9BSG5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.22■□□□□ 0.99
RTBDNQ9BSG5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTBDNQ9BSG5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTBDNQ9BSG5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.22■□□□□ 0.99
RTBDNQ9BSG5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTBDNQ9BSG5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.2■□□□□ 0.98
RTBDNQ9BSG5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTBDNQ9BSG5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.2■□□□□ 0.98
RTBDNQ9BSG5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTBDNQ9BSG5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RTBDNQ9BSG5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.19■□□□□ 0.98
RTBDNQ9BSG5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RTBDNQ9BSG5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTBDNQ9BSG5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTBDNQ9BSG5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTBDNQ9BSG5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTBDNQ9BSG5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.18■□□□□ 0.98
RTBDNQ9BSG5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTBDNQ9BSG5 AC127502.1-201ENST00000399971 1502 ntBASIC21.18■□□□□ 0.98
RTBDNQ9BSG5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTBDNQ9BSG5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTBDNQ9BSG5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.15■□□□□ 0.98
RTBDNQ9BSG5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTBDNQ9BSG5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTBDNQ9BSG5 AC091060.1-201ENST00000623524 1766 ntBASIC21.15■□□□□ 0.98
RTBDNQ9BSG5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTBDNQ9BSG5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTBDNQ9BSG5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RTBDNQ9BSG5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
RTBDNQ9BSG5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTBDNQ9BSG5 AC100797.4-201ENST00000631653 1827 ntBASIC21.14■□□□□ 0.97
RTBDNQ9BSG5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.14■□□□□ 0.97
RTBDNQ9BSG5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTBDNQ9BSG5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTBDNQ9BSG5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTBDNQ9BSG5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTBDNQ9BSG5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTBDNQ9BSG5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RTBDNQ9BSG5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTBDNQ9BSG5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTBDNQ9BSG5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTBDNQ9BSG5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RTBDNQ9BSG5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.12■□□□□ 0.97
RTBDNQ9BSG5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTBDNQ9BSG5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RTBDNQ9BSG5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTBDNQ9BSG5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.11■□□□□ 0.97
RTBDNQ9BSG5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTBDNQ9BSG5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTBDNQ9BSG5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.1■□□□□ 0.97
RTBDNQ9BSG5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
RTBDNQ9BSG5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTBDNQ9BSG5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTBDNQ9BSG5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTBDNQ9BSG5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RTBDNQ9BSG5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms