Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF5Q99942 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF5Q99942 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RNF5Q99942 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RNF5Q99942 DRD5P2-201ENST00000421395 2012 ntBASIC20.55■□□□□ 0.88
RNF5Q99942 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF5Q99942 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF5Q99942 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF5Q99942 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF5Q99942 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF5Q99942 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF5Q99942 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF5Q99942 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.54■□□□□ 0.88
RNF5Q99942 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF5Q99942 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF5Q99942 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF5Q99942 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF5Q99942 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF5Q99942 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF5Q99942 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.53■□□□□ 0.88
RNF5Q99942 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF5Q99942 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RNF5Q99942 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF5Q99942 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF5Q99942 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF5Q99942 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF5Q99942 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RNF5Q99942 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RNF5Q99942 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.52■□□□□ 0.87
RNF5Q99942 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF5Q99942 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF5Q99942 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF5Q99942 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF5Q99942 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RNF5Q99942 DUX4L29-201ENST00000425409 679 ntBASIC20.5■□□□□ 0.87
RNF5Q99942 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF5Q99942 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RNF5Q99942 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF5Q99942 AC100797.4-201ENST00000631653 1827 ntBASIC20.49■□□□□ 0.87
RNF5Q99942 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF5Q99942 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF5Q99942 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF5Q99942 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF5Q99942 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF5Q99942 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RNF5Q99942 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF5Q99942 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF5Q99942 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.48■□□□□ 0.87
RNF5Q99942 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF5Q99942 WHAMMP2-203ENST00000563942 1603 ntBASIC20.48■□□□□ 0.87
RNF5Q99942 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF5Q99942 RPS2P35-201ENST00000443417 897 ntBASIC20.47■□□□□ 0.87
RNF5Q99942 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF5Q99942 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF5Q99942 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF5Q99942 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF5Q99942 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF5Q99942 AP002414.2-202ENST00000590929 1450 ntBASIC20.46■□□□□ 0.87
RNF5Q99942 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RNF5Q99942 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF5Q99942 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF5Q99942 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RNF5Q99942 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF5Q99942 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF5Q99942 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF5Q99942 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF5Q99942 AC021231.2-201ENST00000594613 730 ntBASIC20.44■□□□□ 0.86
RNF5Q99942 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF5Q99942 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF5Q99942 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF5Q99942 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF5Q99942 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF5Q99942 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF5Q99942 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF5Q99942 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF5Q99942 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF5Q99942 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF5Q99942 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF5Q99942 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF5Q99942 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF5Q99942 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF5Q99942 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF5Q99942 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF5Q99942 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF5Q99942 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF5Q99942 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF5Q99942 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RNF5Q99942 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF5Q99942 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF5Q99942 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF5Q99942 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF5Q99942 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF5Q99942 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF5Q99942 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF5Q99942 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF5Q99942 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF5Q99942 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF5Q99942 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RNF5Q99942 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF5Q99942 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms