Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDK5RAP1Q96SZ6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.82■■□□□ 1.88
CDK5RAP1Q96SZ6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDK5RAP1Q96SZ6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.81■■□□□ 1.88
CDK5RAP1Q96SZ6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDK5RAP1Q96SZ6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDK5RAP1Q96SZ6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDK5RAP1Q96SZ6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
CDK5RAP1Q96SZ6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.79■■□□□ 1.88
CDK5RAP1Q96SZ6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDK5RAP1Q96SZ6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDK5RAP1Q96SZ6 MIR4449-201ENST00000578365 66 ntBASIC26.78■■□□□ 1.88
CDK5RAP1Q96SZ6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDK5RAP1Q96SZ6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDK5RAP1Q96SZ6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDK5RAP1Q96SZ6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDK5RAP1Q96SZ6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.77■■□□□ 1.88
CDK5RAP1Q96SZ6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CDK5RAP1Q96SZ6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDK5RAP1Q96SZ6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.76■■□□□ 1.87
CDK5RAP1Q96SZ6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
CDK5RAP1Q96SZ6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CDK5RAP1Q96SZ6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CDK5RAP1Q96SZ6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDK5RAP1Q96SZ6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDK5RAP1Q96SZ6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.75■■□□□ 1.87
CDK5RAP1Q96SZ6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDK5RAP1Q96SZ6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.75■■□□□ 1.87
CDK5RAP1Q96SZ6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDK5RAP1Q96SZ6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CDK5RAP1Q96SZ6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.74■■□□□ 1.87
CDK5RAP1Q96SZ6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDK5RAP1Q96SZ6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.73■■□□□ 1.87
CDK5RAP1Q96SZ6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDK5RAP1Q96SZ6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDK5RAP1Q96SZ6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDK5RAP1Q96SZ6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.71■■□□□ 1.87
CDK5RAP1Q96SZ6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.71■■□□□ 1.87
CDK5RAP1Q96SZ6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CDK5RAP1Q96SZ6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CDK5RAP1Q96SZ6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDK5RAP1Q96SZ6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDK5RAP1Q96SZ6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDK5RAP1Q96SZ6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.69■■□□□ 1.86
CDK5RAP1Q96SZ6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.69■■□□□ 1.86
CDK5RAP1Q96SZ6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDK5RAP1Q96SZ6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDK5RAP1Q96SZ6 AC008813.1-201ENST00000536597 885 ntBASIC26.68■■□□□ 1.86
CDK5RAP1Q96SZ6 AC110285.7-201ENST00000624417 1536 ntBASIC26.68■■□□□ 1.86
CDK5RAP1Q96SZ6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDK5RAP1Q96SZ6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDK5RAP1Q96SZ6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CDK5RAP1Q96SZ6 ABCB10P1-201ENST00000614297 2181 ntBASIC26.67■■□□□ 1.86
CDK5RAP1Q96SZ6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDK5RAP1Q96SZ6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDK5RAP1Q96SZ6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDK5RAP1Q96SZ6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.66■■□□□ 1.86
CDK5RAP1Q96SZ6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CDK5RAP1Q96SZ6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CDK5RAP1Q96SZ6 AL139393.2-201ENST00000608721 2025 ntBASIC26.65■■□□□ 1.86
CDK5RAP1Q96SZ6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CDK5RAP1Q96SZ6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDK5RAP1Q96SZ6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.63■■□□□ 1.85
CDK5RAP1Q96SZ6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDK5RAP1Q96SZ6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDK5RAP1Q96SZ6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDK5RAP1Q96SZ6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.61■■□□□ 1.85
CDK5RAP1Q96SZ6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.6■■□□□ 1.85
CDK5RAP1Q96SZ6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDK5RAP1Q96SZ6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.6■■□□□ 1.85
CDK5RAP1Q96SZ6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CDK5RAP1Q96SZ6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.59■■□□□ 1.85
CDK5RAP1Q96SZ6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDK5RAP1Q96SZ6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.58■■□□□ 1.85
CDK5RAP1Q96SZ6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDK5RAP1Q96SZ6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDK5RAP1Q96SZ6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDK5RAP1Q96SZ6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.57■■□□□ 1.84
CDK5RAP1Q96SZ6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.57■■□□□ 1.84
CDK5RAP1Q96SZ6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.57■■□□□ 1.84
CDK5RAP1Q96SZ6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CDK5RAP1Q96SZ6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CDK5RAP1Q96SZ6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.56■■□□□ 1.84
CDK5RAP1Q96SZ6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CDK5RAP1Q96SZ6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms