Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAB40CQ96S21 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB40CQ96S21 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RAB40CQ96S21 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB40CQ96S21 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RAB40CQ96S21 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB40CQ96S21 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAB40CQ96S21 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB40CQ96S21 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RAB40CQ96S21 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40CQ96S21 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40CQ96S21 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40CQ96S21 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40CQ96S21 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB40CQ96S21 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB40CQ96S21 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RAB40CQ96S21 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
RAB40CQ96S21 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40CQ96S21 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB40CQ96S21 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB40CQ96S21 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
RAB40CQ96S21 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB40CQ96S21 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
RAB40CQ96S21 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40CQ96S21 AL133380.1-201ENST00000506013 324 ntBASIC20.64■□□□□ 0.89
RAB40CQ96S21 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.64■□□□□ 0.89
RAB40CQ96S21 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB40CQ96S21 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB40CQ96S21 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RAB40CQ96S21 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40CQ96S21 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB40CQ96S21 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40CQ96S21 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40CQ96S21 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.63■□□□□ 0.89
RAB40CQ96S21 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40CQ96S21 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB40CQ96S21 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40CQ96S21 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40CQ96S21 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB40CQ96S21 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40CQ96S21 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40CQ96S21 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40CQ96S21 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40CQ96S21 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40CQ96S21 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40CQ96S21 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40CQ96S21 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
RAB40CQ96S21 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40CQ96S21 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40CQ96S21 AL449106.1-201ENST00000608517 1980 ntBASIC20.6■□□□□ 0.89
RAB40CQ96S21 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.6■□□□□ 0.89
RAB40CQ96S21 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40CQ96S21 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40CQ96S21 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAB40CQ96S21 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40CQ96S21 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.59■□□□□ 0.89
RAB40CQ96S21 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB40CQ96S21 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB40CQ96S21 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.58■□□□□ 0.88
RAB40CQ96S21 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB40CQ96S21 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40CQ96S21 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40CQ96S21 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB40CQ96S21 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB40CQ96S21 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40CQ96S21 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40CQ96S21 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40CQ96S21 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40CQ96S21 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40CQ96S21 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40CQ96S21 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RAB40CQ96S21 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40CQ96S21 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RAB40CQ96S21 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40CQ96S21 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40CQ96S21 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40CQ96S21 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB40CQ96S21 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB40CQ96S21 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAB40CQ96S21 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40CQ96S21 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40CQ96S21 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.54■□□□□ 0.88
RAB40CQ96S21 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40CQ96S21 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40CQ96S21 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40CQ96S21 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RAB40CQ96S21 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB40CQ96S21 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RAB40CQ96S21 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAB40CQ96S21 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB40CQ96S21 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40CQ96S21 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40CQ96S21 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.52■□□□□ 0.87
RAB40CQ96S21 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.51■□□□□ 0.87
RAB40CQ96S21 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB40CQ96S21 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB40CQ96S21 AC127502.1-201ENST00000399971 1502 ntBASIC20.51■□□□□ 0.87
RAB40CQ96S21 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40CQ96S21 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40CQ96S21 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms