Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
CFAP53Q96M91 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
CFAP53Q96M91 AL139393.2-201ENST00000608721 2025 ntBASIC34.54■■■■□ 3.12
CFAP53Q96M91 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CFAP53Q96M91 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CFAP53Q96M91 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CFAP53Q96M91 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CFAP53Q96M91 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC34.53■■■■□ 3.12
CFAP53Q96M91 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CFAP53Q96M91 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CFAP53Q96M91 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC34.52■■■■□ 3.12
CFAP53Q96M91 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
CFAP53Q96M91 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CFAP53Q96M91 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
CFAP53Q96M91 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CFAP53Q96M91 MIR3648-2-201ENST00000581792 180 ntBASIC34.51■■■■□ 3.12
CFAP53Q96M91 MIR3648-1-201ENST00000615959 180 ntBASIC34.51■■■■□ 3.12
CFAP53Q96M91 GDI1-215ENST00000630693 786 ntTSL 4 BASIC34.51■■■■□ 3.12
CFAP53Q96M91 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC34.51■■■■□ 3.11
CFAP53Q96M91 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
CFAP53Q96M91 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC34.5■■■■□ 3.11
CFAP53Q96M91 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC34.5■■■■□ 3.11
CFAP53Q96M91 CR559946.2-201ENST00000623684 991 ntBASIC34.5■■■■□ 3.11
CFAP53Q96M91 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CFAP53Q96M91 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CFAP53Q96M91 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC34.49■■■■□ 3.11
CFAP53Q96M91 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC34.48■■■■□ 3.11
CFAP53Q96M91 MEST-211ENST00000437945 1455 ntTSL 5 BASIC34.47■■■■□ 3.11
CFAP53Q96M91 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CFAP53Q96M91 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC34.46■■■■□ 3.11
CFAP53Q96M91 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC34.46■■■■□ 3.11
CFAP53Q96M91 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CFAP53Q96M91 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CFAP53Q96M91 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC34.45■■■■□ 3.11
CFAP53Q96M91 AC016575.1-201ENST00000607026 382 ntBASIC34.45■■■■□ 3.11
CFAP53Q96M91 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
CFAP53Q96M91 HLA-V-202ENST00000446817 847 ntBASIC34.44■■■■□ 3.1
CFAP53Q96M91 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CFAP53Q96M91 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC34.44■■■■□ 3.1
CFAP53Q96M91 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CFAP53Q96M91 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC34.42■■■■□ 3.1
CFAP53Q96M91 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CFAP53Q96M91 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC34.42■■■■□ 3.1
CFAP53Q96M91 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC34.42■■■■□ 3.1
CFAP53Q96M91 MBP-237ENST00000579129 1052 ntTSL 5 BASIC34.41■■■■□ 3.1
CFAP53Q96M91 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
CFAP53Q96M91 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC34.4■■■■□ 3.1
CFAP53Q96M91 HES6-205ENST00000409356 528 ntTSL 2 BASIC34.4■■■■□ 3.1
CFAP53Q96M91 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CFAP53Q96M91 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC34.39■■■■□ 3.1
CFAP53Q96M91 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC34.39■■■■□ 3.1
CFAP53Q96M91 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC34.38■■■■□ 3.09
CFAP53Q96M91 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CFAP53Q96M91 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC34.37■■■■□ 3.09
CFAP53Q96M91 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC34.37■■■■□ 3.09
CFAP53Q96M91 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC34.37■■■■□ 3.09
CFAP53Q96M91 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CFAP53Q96M91 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC34.35■■■■□ 3.09
CFAP53Q96M91 RPS2-202ENST00000526522 924 ntTSL 2 BASIC34.35■■■■□ 3.09
CFAP53Q96M91 CHST11-202ENST00000546689 756 ntTSL 2 BASIC34.35■■■■□ 3.09
CFAP53Q96M91 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC34.34■■■■□ 3.09
CFAP53Q96M91 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CFAP53Q96M91 MIR639-201ENST00000384974 98 ntBASIC34.33■■■■□ 3.09
CFAP53Q96M91 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC34.32■■■■□ 3.08
CFAP53Q96M91 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
CFAP53Q96M91 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC34.32■■■■□ 3.08
CFAP53Q96M91 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
CFAP53Q96M91 AC100797.4-201ENST00000631653 1827 ntBASIC34.31■■■■□ 3.08
CFAP53Q96M91 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC34.31■■■■□ 3.08
CFAP53Q96M91 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC34.31■■■■□ 3.08
CFAP53Q96M91 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
CFAP53Q96M91 AC110285.7-201ENST00000624417 1536 ntBASIC34.3■■■■□ 3.08
CFAP53Q96M91 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CFAP53Q96M91 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC34.3■■■■□ 3.08
CFAP53Q96M91 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
CFAP53Q96M91 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC34.29■■■■□ 3.08
CFAP53Q96M91 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC34.29■■■■□ 3.08
CFAP53Q96M91 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CFAP53Q96M91 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CFAP53Q96M91 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CFAP53Q96M91 ABCB10P3-201ENST00000561950 2166 ntBASIC34.28■■■■□ 3.08
CFAP53Q96M91 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CFAP53Q96M91 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC34.28■■■■□ 3.08
CFAP53Q96M91 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CFAP53Q96M91 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.08
CFAP53Q96M91 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.08
CFAP53Q96M91 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFAP53Q96M91 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC34.23■■■■□ 3.07
CFAP53Q96M91 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC34.23■■■■□ 3.07
CFAP53Q96M91 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CFAP53Q96M91 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC34.23■■■■□ 3.07
CFAP53Q96M91 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CFAP53Q96M91 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC34.22■■■■□ 3.07
CFAP53Q96M91 METRNL-202ENST00000570778 967 ntTSL 5 BASIC34.21■■■■□ 3.07
CFAP53Q96M91 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC34.2■■■■□ 3.07
CFAP53Q96M91 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
CFAP53Q96M91 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC34.2■■■■□ 3.07
CFAP53Q96M91 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC34.2■■■■□ 3.07
CFAP53Q96M91 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
CFAP53Q96M91 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC34.19■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms