Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.54■□□□□ 0.72
LINC00479Q96M42 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00479Q96M42 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.53■□□□□ 0.72
LINC00479Q96M42 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00479Q96M42 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC00479Q96M42 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00479Q96M42 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00479Q96M42 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00479Q96M42 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.52■□□□□ 0.72
LINC00479Q96M42 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.52■□□□□ 0.72
LINC00479Q96M42 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.52■□□□□ 0.72
LINC00479Q96M42 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
LINC00479Q96M42 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00479Q96M42 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.51■□□□□ 0.71
LINC00479Q96M42 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00479Q96M42 LINC01003-201ENST00000564834 1764 ntBASIC19.51■□□□□ 0.71
LINC00479Q96M42 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00479Q96M42 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LINC00479Q96M42 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00479Q96M42 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00479Q96M42 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00479Q96M42 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00479Q96M42 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LINC00479Q96M42 AP002365.1-201ENST00000603448 772 ntBASIC19.49■□□□□ 0.71
LINC00479Q96M42 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00479Q96M42 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00479Q96M42 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.48■□□□□ 0.71
LINC00479Q96M42 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LINC00479Q96M42 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.48■□□□□ 0.71
LINC00479Q96M42 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00479Q96M42 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC00479Q96M42 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LINC00479Q96M42 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00479Q96M42 AL133380.1-201ENST00000506013 324 ntBASIC19.47■□□□□ 0.71
LINC00479Q96M42 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00479Q96M42 AP004833.2-201ENST00000532228 1454 ntBASIC19.47■□□□□ 0.71
LINC00479Q96M42 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LINC00479Q96M42 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.46■□□□□ 0.71
LINC00479Q96M42 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.46■□□□□ 0.71
LINC00479Q96M42 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LINC00479Q96M42 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00479Q96M42 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00479Q96M42 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00479Q96M42 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00479Q96M42 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.46■□□□□ 0.71
LINC00479Q96M42 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00479Q96M42 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00479Q96M42 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
LINC00479Q96M42 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00479Q96M42 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00479Q96M42 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00479Q96M42 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00479Q96M42 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC00479Q96M42 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00479Q96M42 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00479Q96M42 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.44■□□□□ 0.7
LINC00479Q96M42 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC00479Q96M42 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LINC00479Q96M42 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00479Q96M42 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00479Q96M42 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00479Q96M42 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC00479Q96M42 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00479Q96M42 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LINC00479Q96M42 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
LINC00479Q96M42 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00479Q96M42 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00479Q96M42 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
LINC00479Q96M42 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LINC00479Q96M42 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00479Q96M42 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00479Q96M42 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00479Q96M42 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00479Q96M42 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.39■□□□□ 0.69
LINC00479Q96M42 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00479Q96M42 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00479Q96M42 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC00479Q96M42 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00479Q96M42 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.38■□□□□ 0.69
LINC00479Q96M42 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00479Q96M42 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LINC00479Q96M42 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00479Q96M42 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
LINC00479Q96M42 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00479Q96M42 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00479Q96M42 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LINC00479Q96M42 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00479Q96M42 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.36■□□□□ 0.69
LINC00479Q96M42 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC00479Q96M42 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00479Q96M42 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00479Q96M42 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00479Q96M42 AC100797.4-201ENST00000631653 1827 ntBASIC19.35■□□□□ 0.69
LINC00479Q96M42 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LINC00479Q96M42 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.35■□□□□ 0.69
LINC00479Q96M42 AC127502.1-201ENST00000399971 1502 ntBASIC19.35■□□□□ 0.69
LINC00479Q96M42 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00479Q96M42 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00479Q96M42 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00479Q96M42 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms