Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAX2Q96IS3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.89■□□□□ 0.77
RAX2Q96IS3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.89■□□□□ 0.77
RAX2Q96IS3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAX2Q96IS3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAX2Q96IS3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.88■□□□□ 0.77
RAX2Q96IS3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAX2Q96IS3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAX2Q96IS3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.88■□□□□ 0.77
RAX2Q96IS3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAX2Q96IS3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.87■□□□□ 0.77
RAX2Q96IS3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAX2Q96IS3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RAX2Q96IS3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.87■□□□□ 0.77
RAX2Q96IS3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAX2Q96IS3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.86■□□□□ 0.77
RAX2Q96IS3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAX2Q96IS3 AC135983.2-203ENST00000454486 1613 ntBASIC19.86■□□□□ 0.77
RAX2Q96IS3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAX2Q96IS3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAX2Q96IS3 WHAMMP2-203ENST00000563942 1603 ntBASIC19.85■□□□□ 0.77
RAX2Q96IS3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RAX2Q96IS3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAX2Q96IS3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAX2Q96IS3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAX2Q96IS3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAX2Q96IS3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAX2Q96IS3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RAX2Q96IS3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
RAX2Q96IS3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.83■□□□□ 0.77
RAX2Q96IS3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAX2Q96IS3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAX2Q96IS3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAX2Q96IS3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAX2Q96IS3 ST7-AS1-201ENST00000456775 1889 ntBASIC19.82■□□□□ 0.76
RAX2Q96IS3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAX2Q96IS3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RAX2Q96IS3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAX2Q96IS3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RAX2Q96IS3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.8■□□□□ 0.76
RAX2Q96IS3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAX2Q96IS3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAX2Q96IS3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAX2Q96IS3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.79■□□□□ 0.76
RAX2Q96IS3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAX2Q96IS3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAX2Q96IS3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.76■□□□□ 0.75
RAX2Q96IS3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.76■□□□□ 0.75
RAX2Q96IS3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAX2Q96IS3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAX2Q96IS3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAX2Q96IS3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.76■□□□□ 0.75
RAX2Q96IS3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAX2Q96IS3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.75■□□□□ 0.75
RAX2Q96IS3 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.75■□□□□ 0.75
RAX2Q96IS3 HSD17B1P1-201ENST00000590052 955 ntBASIC19.75■□□□□ 0.75
RAX2Q96IS3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAX2Q96IS3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RAX2Q96IS3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RAX2Q96IS3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAX2Q96IS3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAX2Q96IS3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.74■□□□□ 0.75
RAX2Q96IS3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAX2Q96IS3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAX2Q96IS3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAX2Q96IS3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.73■□□□□ 0.75
RAX2Q96IS3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAX2Q96IS3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RAX2Q96IS3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAX2Q96IS3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAX2Q96IS3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAX2Q96IS3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAX2Q96IS3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RAX2Q96IS3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAX2Q96IS3 AC110285.7-201ENST00000624417 1536 ntBASIC19.71■□□□□ 0.75
RAX2Q96IS3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.71■□□□□ 0.75
RAX2Q96IS3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAX2Q96IS3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAX2Q96IS3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAX2Q96IS3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAX2Q96IS3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAX2Q96IS3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAX2Q96IS3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.7■□□□□ 0.74
RAX2Q96IS3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.7■□□□□ 0.74
RAX2Q96IS3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.7■□□□□ 0.74
RAX2Q96IS3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAX2Q96IS3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
RAX2Q96IS3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.69■□□□□ 0.74
RAX2Q96IS3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms