Protein–RNA interactions for Protein: Q8N5P1

ZC3H8, Zinc finger CCCH domain-containing protein 8, humanhuman

Known RBP eCLIP

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8Q8N5P1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.96■■□□□ 1.114e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.8■□□□□ 0.764e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.53■□□□□ 0.724e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-224ENST00000581718 574 ntTSL 219.46■□□□□ 0.714e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-203ENST00000472367 794 ntTSL 318.12■□□□□ 0.494e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-212ENST00000483588 688 ntTSL 317.43■□□□□ 0.384e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-229ENST00000584177 574 ntTSL 416.88■□□□□ 0.294e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.18□□□□□ -0.144e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.18□□□□□ -0.144e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.64□□□□□ -0.234e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-217ENST00000497774 1662 ntTSL 513.53□□□□□ -0.244e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.36□□□□□ -0.274e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-206ENST00000477249 891 ntTSL 512.79□□□□□ -0.364e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-215ENST00000491009 863 ntTSL 212.7□□□□□ -0.384e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC11.81□□□□□ -0.524e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-207ENST00000478103 712 ntTSL 310.38□□□□□ -0.754e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-227ENST00000583400 712 ntTSL 49.94□□□□□ -0.824e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC9.94□□□□□ -0.824e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-201ENST00000460249 773 ntTSL 39.78□□□□□ -0.844e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-204ENST00000475947 598 ntTSL 29.78□□□□□ -0.844e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-222ENST00000580770 572 ntTSL 49.78□□□□□ -0.844e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-221ENST00000580180 753 ntTSL 28.64□□□□□ -1.034e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.82□□□□□ -1.164e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-230ENST00000584926 604 ntTSL 57.43□□□□□ -1.224e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)6.95□□□□□ -1.34e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.23□□□□□ -1.414e-8■■□□□ 13.6
ZC3H8Q8N5P1 LRRC75A-AS1-216ENST00000492250 565 ntTSL 54.49□□□□□ -1.694e-8■■□□□ 13.6
ZC3H8Q8N5P1 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.952e-6■■□□□ 13.3
ZC3H8Q8N5P1 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.992e-6■■□□□ 13.3
ZC3H8Q8N5P1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.372e-6■■□□□ 13.3
ZC3H8Q8N5P1 SNORD12C-201ENST00000386307 89 ntBASIC1.36□□□□□ -2.192e-22■■□□□ 13.3
ZC3H8Q8N5P1 U8.4-201ENST00000363626 134 ntBASIC5.15□□□□□ -1.594e-15■■□□□ 13.2
ZC3H8Q8N5P1 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.151e-6■■□□□ 13
ZC3H8Q8N5P1 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.151e-6■■□□□ 13
ZC3H8Q8N5P1 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.151e-6■■□□□ 13
ZC3H8Q8N5P1 SCARNA23-201ENST00000516060 130 ntBASIC1.01□□□□□ -2.251e-6■■□□□ 13
ZC3H8Q8N5P1 RPL4-204ENST00000563473 475 ntTSL 35.94□□□□□ -1.462e-7■■□□□ 12.7
ZC3H8Q8N5P1 SNORD18C-201ENST00000362704 69 ntBASIC-1.45□□□□□ -2.642e-7■■□□□ 12.7
ZC3H8Q8N5P1 TAF1D-206ENST00000527068 1023 ntTSL 57.45□□□□□ -1.226e-19■■□□□ 12.7
ZC3H8Q8N5P1 SNORA18-201ENST00000384416 132 ntBASIC1.32□□□□□ -2.26e-19■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-216ENST00000580888 710 ntTSL 217.88■□□□□ 0.455e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.61■□□□□ 0.415e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-207ENST00000578324 1577 ntTSL 516.26■□□□□ 0.195e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.155e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-228ENST00000583389 951 ntTSL 314.66□□□□□ -0.065e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-235ENST00000584860 1109 ntTSL 313.85□□□□□ -0.195e-38■■□□□ 12.7
ZC3H8Q8N5P1 SNORD10-201ENST00000459579 142 ntBASIC12.27□□□□□ -0.455e-38■■□□□ 12.7
ZC3H8Q8N5P1 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC11.85□□□□□ -0.515e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-236ENST00000584901 1021 ntTSL 211.58□□□□□ -0.565e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-218ENST00000581544 1444 ntTSL 211.51□□□□□ -0.575e-38■■□□□ 12.7
ZC3H8Q8N5P1 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.635e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC10.95□□□□□ -0.665e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-229ENST00000583802 563 ntTSL 410.88□□□□□ -0.675e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-217ENST00000581384 642 ntTSL 510.2□□□□□ -0.785e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-233ENST00000584784 818 ntTSL 59.69□□□□□ -0.865e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-209ENST00000578495 916 ntTSL 59.05□□□□□ -0.965e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-237ENST00000585024 577 ntTSL 48.5□□□□□ -1.055e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-202ENST00000396527 1169 ntTSL 27.82□□□□□ -1.165e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-211ENST00000578754 547 ntTSL 45.49□□□□□ -1.535e-38■■□□□ 12.7
ZC3H8Q8N5P1 EIF4A1-204ENST00000577731 574 ntTSL 23.28□□□□□ -1.885e-38■■□□□ 12.7
ZC3H8Q8N5P1 MALAT1-202ENST00000534336 8708 ntBASIC9.89□□□□□ -0.832e-25■■□□□ 12.6
ZC3H8Q8N5P1 SNORD14E-201ENST00000364009 85 ntBASIC1.93□□□□□ -2.11e-40■■□□□ 12.6
ZC3H8Q8N5P1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.315e-9■■□□□ 12.4
ZC3H8Q8N5P1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.285e-9■■□□□ 12.4
ZC3H8Q8N5P1 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.31□□□□□ -0.125e-9■■□□□ 12.4
ZC3H8Q8N5P1 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.22□□□□□ -0.135e-9■■□□□ 12.4
ZC3H8Q8N5P1 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.28□□□□□ -0.285e-9■■□□□ 12.4
ZC3H8Q8N5P1 DKC1-210ENST00000481062 819 ntTSL 212.74□□□□□ -0.375e-9■■□□□ 12.4
ZC3H8Q8N5P1 RC3H2-210ENST00000498479 5746 ntTSL 212.37□□□□□ -0.435e-9■■□□□ 12.4
ZC3H8Q8N5P1 RC3H2-202ENST00000357244 3991 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.615e-9■■□□□ 12.4
ZC3H8Q8N5P1 DKC1-209ENST00000475966 902 ntTSL 510.21□□□□□ -0.775e-9■■□□□ 12.4
ZC3H8Q8N5P1 DKC1-204ENST00000426673 843 ntTSL 59.51□□□□□ -0.895e-9■■□□□ 12.4
ZC3H8Q8N5P1 DKC1-212ENST00000492372 406 ntTSL 28.39□□□□□ -1.075e-9■■□□□ 12.4
ZC3H8Q8N5P1 DKC1-202ENST00000412124 670 ntTSL 57.24□□□□□ -1.255e-9■■□□□ 12.4
ZC3H8Q8N5P1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.685e-9■■□□□ 12.4
ZC3H8Q8N5P1 SNORA56-201ENST00000383966 129 ntBASIC4.46□□□□□ -1.75e-9■■□□□ 12.4
ZC3H8Q8N5P1 SNORD90-201ENST00000391145 111 ntBASIC0.43□□□□□ -2.345e-9■■□□□ 12.4
ZC3H8Q8N5P1 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.283e-15■■□□□ 12.3
ZC3H8Q8N5P1 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.72□□□□□ -1.333e-15■■□□□ 12.3
ZC3H8Q8N5P1 CNOT1-211ENST00000567188 7830 ntTSL 1 (best)6.24□□□□□ -1.413e-15■■□□□ 12.3
ZC3H8Q8N5P1 CNOT1-212ENST00000567285 722 ntTSL 45.87□□□□□ -1.473e-15■■□□□ 12.3
ZC3H8Q8N5P1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.693e-15■■□□□ 12.3
ZC3H8Q8N5P1 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.923e-15■■□□□ 12.3
ZC3H8Q8N5P1 SNORD65-201ENST00000391079 73 ntBASIC5.95□□□□□ -1.465e-12■■□□□ 12.2
ZC3H8Q8N5P1 CHD8-206ENST00000553870 679 ntTSL 59.35□□□□□ -0.913e-6■■□□□ 12.2
ZC3H8Q8N5P1 SNORD9-201ENST00000362566 104 ntBASIC3.66□□□□□ -1.823e-6■■□□□ 12.2
ZC3H8Q8N5P1 SNHG1-225ENST00000545920 625 ntTSL 26.31□□□□□ -1.44e-11■■□□□ 12.1
ZC3H8Q8N5P1 SNHG1-201ENST00000535076 849 ntTSL 25.7□□□□□ -1.55e-11■■□□□ 12.1
ZC3H8Q8N5P1 NCL-207ENST00000461347 3967 ntTSL 215.21■□□□□ 0.031e-15■■□□□ 12
ZC3H8Q8N5P1 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.51e-15■■□□□ 12
ZC3H8Q8N5P1 NCL-210ENST00000494618 910 ntTSL 26.49□□□□□ -1.371e-15■■□□□ 12
ZC3H8Q8N5P1 SNORD82-201ENST00000365530 70 ntBASIC4.33□□□□□ -1.721e-15■■□□□ 12
ZC3H8Q8N5P1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.41□□□□□ -0.11e-8■■□□□ 12
ZC3H8Q8N5P1 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.61□□□□□ -1.193e-25■■□□□ 11.7
ZC3H8Q8N5P1 MT-TG-201ENST00000387429 68 ntBASIC2.84□□□□□ -1.953e-17■■□□□ 11.7
ZC3H8Q8N5P1 SNORD49B-201ENST00000365172 72 ntBASIC-0.05□□□□□ -2.423e-8■■□□□ 11.6
ZC3H8Q8N5P1 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC13.48□□□□□ -0.251e-8■■□□□ 11.6
ZC3H8Q8N5P1 NEAT1_3.1-201ENST00000613347 159 ntBASIC11.12□□□□□ -0.631e-8■■□□□ 11.6
ZC3H8Q8N5P1 SNORD42A-201ENST00000459584 64 ntBASIC4.63□□□□□ -1.673e-6■■□□□ 11.5
ZC3H8Q8N5P1 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.361e-22■■□□□ 11.4
Retrieved 100 of 950 protein–RNA pairs in 17.7 ms