RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 AEBP2Q6ZN18 517 aaPredicted RBP12.53□□□□□ -0.4
SCARNA23-201ENST00000516060 CHIC1Q5VXU3 224 aa11.65□□□□□ -0.54
SCARNA23-201ENST00000516060 SENP3Q9H4L4 574 aaPredicted RBP10.72□□□□□ -0.69
SCARNA23-201ENST00000516060 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
SCARNA23-201ENST00000516060 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
SCARNA23-201ENST00000516060 FOXD1Q16676 465 aa10.08□□□□□ -0.8
SCARNA23-201ENST00000516060 MSH5O43196 834 aa9.59□□□□□ -0.87
SCARNA23-201ENST00000516060 PIAS4Q8N2W9 510 aaPredicted RBP9.28□□□□□ -0.92
SCARNA23-201ENST00000516060 PPP6R1Q9UPN7 881 aa9.07□□□□□ -0.96
SCARNA23-201ENST00000516060 ADRA2BP18089 450 aa8.99□□□□□ -0.97
SCARNA23-201ENST00000516060 PLPPR3Q6T4P5 718 aa8.88□□□□□ -0.99
SCARNA23-201ENST00000516060 CACNB1Q02641 598 aaPredicted RBP8.52□□□□□ -1.05
SCARNA23-201ENST00000516060 DMRT2Q9Y5R5 561 aa8.44□□□□□ -1.06
SCARNA23-201ENST00000516060 MAPK8IP2Q13387 824 aaPredicted RBP8.42□□□□□ -1.06
SCARNA23-201ENST00000516060 SCAF1Q9H7N4 1312 aaKnown RBP8.2□□□□□ -1.1
SCARNA23-201ENST00000516060 RNF39Q9H2S5 420 aa8.16□□□□□ -1.1
SCARNA23-201ENST00000516060 DCAF8L1A6NGE4 600 aa8.09□□□□□ -1.11
SCARNA23-201ENST00000516060 C1QBPQ07021 282 aaKnown RBP7.99□□□□□ -1.13
SCARNA23-201ENST00000516060 HOXD11P31277 338 aaPredicted RBP7.95□□□□□ -1.14
SCARNA23-201ENST00000516060 POTEHQ6S545 545 aa7.89□□□□□ -1.15
SCARNA23-201ENST00000516060 DNAJC5BQ9UF47 199 aa7.76□□□□□ -1.17
SCARNA23-201ENST00000516060 RNF216Q9NWF9 866 aaPredicted RBP7.75□□□□□ -1.17
SCARNA23-201ENST00000516060 PPP4R3CPQ6ZMV5 832 aa7.73□□□□□ -1.17
SCARNA23-201ENST00000516060 CNKSR2Q8WXI2 1034 aa7.69□□□□□ -1.18
SCARNA23-201ENST00000516060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCARNA23-201ENST00000516060 DSG3P32926 999 aa7.48□□□□□ -1.21
SCARNA23-201ENST00000516060 SPINK5Q9NQ38 1064 aaPredicted RBP7.4□□□□□ -1.22
SCARNA23-201ENST00000516060 CAPN15O75808 1086 aa7.38□□□□□ -1.23
SCARNA23-201ENST00000516060 U3KPZ7 1027 aaPredicted RBP7.36□□□□□ -1.23
SCARNA23-201ENST00000516060 NCBP3Q53F19 620 aaKnown RBP7.26□□□□□ -1.25
SCARNA23-201ENST00000516060 NPM3O75607 178 aaKnown RBP7.19□□□□□ -1.26
SCARNA23-201ENST00000516060 ABCB7O75027 752 aa7.18□□□□□ -1.26
SCARNA23-201ENST00000516060 CHRDL2Q6WN34 429 aa7.17□□□□□ -1.26
SCARNA23-201ENST00000516060 SP7Q8TDD2 431 aaPredicted RBP7.17□□□□□ -1.26
SCARNA23-201ENST00000516060 TRHP20396 242 aaPredicted RBP7.15□□□□□ -1.26
SCARNA23-201ENST00000516060 RBM42Q9BTD8 480 aaKnown RBP7.11□□□□□ -1.27
SCARNA23-201ENST00000516060 ZNF219Q9P2Y4 722 aaPredicted RBP7.11□□□□□ -1.27
SCARNA23-201ENST00000516060 APLP2Q06481 763 aa7.05□□□□□ -1.28
SCARNA23-201ENST00000516060 SLC4A2P04920 1241 aa7.01□□□□□ -1.29
SCARNA23-201ENST00000516060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.94□□□□□ -1.3
SCARNA23-201ENST00000516060 HNRNPUL2Q1KMD3 747 aaKnown RBP6.94□□□□□ -1.3
SCARNA23-201ENST00000516060 PIP4P2Q8N4L2 257 aa6.9□□□□□ -1.3
SCARNA23-201ENST00000516060 HAX1O00165 279 aa6.89□□□□□ -1.31
SCARNA23-201ENST00000516060 SAMD1Q6SPF0 538 aaPredicted RBP6.89□□□□□ -1.31
SCARNA23-201ENST00000516060 POLA2Q14181 598 aa6.86□□□□□ -1.31
SCARNA23-201ENST00000516060 AKT1S1Q96B36 256 aa6.86□□□□□ -1.31
SCARNA23-201ENST00000516060 EVX2Q03828 476 aa6.82□□□□□ -1.32
SCARNA23-201ENST00000516060 REM2Q8IYK8 340 aaPredicted RBP6.81□□□□□ -1.32
SCARNA23-201ENST00000516060 FXR2P51116 673 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCARNA23-201ENST00000516060 PITPNM1O00562 1244 aa6.74□□□□□ -1.33
SCARNA23-201ENST00000516060 LHX8Q68G74 356 aa6.72□□□□□ -1.33
SCARNA23-201ENST00000516060 PLSCR2Q9NRY7 297 aa6.67□□□□□ -1.34
SCARNA23-201ENST00000516060 OSCARQ8IYS5 282 aa6.65□□□□□ -1.34
SCARNA23-201ENST00000516060 ZBTB12Q9Y330 459 aaPredicted RBP6.65□□□□□ -1.34
SCARNA23-201ENST00000516060 MYCNP04198 464 aaPredicted RBP6.64□□□□□ -1.35
SCARNA23-201ENST00000516060 KCNA4P22459 653 aa6.63□□□□□ -1.35
SCARNA23-201ENST00000516060 GABBR2O75899 941 aa6.61□□□□□ -1.35
SCARNA23-201ENST00000516060 C19orf67A6NJJ6 358 aa6.59□□□□□ -1.35
SCARNA23-201ENST00000516060 ATF5Q9Y2D1 282 aaPredicted RBP6.57□□□□□ -1.36
SCARNA23-201ENST00000516060 PRKAR2AP13861 404 aaKnown RBP6.56□□□□□ -1.36
SCARNA23-201ENST00000516060 POTEIP0CG38 1075 aa6.49□□□□□ -1.37
SCARNA23-201ENST00000516060 CLEC11AQ9Y240 323 aa6.44□□□□□ -1.38
SCARNA23-201ENST00000516060 SPDYE2BA6NHP3 402 aa6.42□□□□□ -1.38
SCARNA23-201ENST00000516060 SPDYE6P0CI01 402 aa6.42□□□□□ -1.38
SCARNA23-201ENST00000516060 SPDYE2Q495Y8 402 aa6.42□□□□□ -1.38
SCARNA23-201ENST00000516060 SPDYE1Q8NFV5 336 aaPredicted RBP6.42□□□□□ -1.38
SCARNA23-201ENST00000516060 CHADLQ6NUI6 762 aa6.39□□□□□ -1.39
SCARNA23-201ENST00000516060 POTEMA6NI47 508 aa6.35□□□□□ -1.39
SCARNA23-201ENST00000516060 OTUD5Q96G74 571 aa6.33□□□□□ -1.4
SCARNA23-201ENST00000516060 CLCN6P51797 869 aa6.32□□□□□ -1.4
SCARNA23-201ENST00000516060 CD44P16070 742 aaKnown RBP6.31□□□□□ -1.4
SCARNA23-201ENST00000516060 POTEGQ6S5H5 508 aa6.31□□□□□ -1.4
SCARNA23-201ENST00000516060 FOXD4L1Q9NU39 408 aa6.31□□□□□ -1.4
SCARNA23-201ENST00000516060 DCBLD2Q96PD2 775 aa6.3□□□□□ -1.4
SCARNA23-201ENST00000516060 SSUH2Q9Y2M2 353 aa6.3□□□□□ -1.4
SCARNA23-201ENST00000516060 FBLN2P98095 1184 aa6.28□□□□□ -1.4
SCARNA23-201ENST00000516060 ZNF692Q9BU19 519 aaPredicted RBP6.27□□□□□ -1.41
SCARNA23-201ENST00000516060 POTEB2H3BUK9 544 aa6.26□□□□□ -1.41
SCARNA23-201ENST00000516060 PRR29P0C7W0 189 aa6.26□□□□□ -1.41
SCARNA23-201ENST00000516060 PCDH10Q9P2E7 1040 aa6.26□□□□□ -1.41
SCARNA23-201ENST00000516060 FARP1Q9Y4F1 1045 aaPredicted RBP6.24□□□□□ -1.41
SCARNA23-201ENST00000516060 MKRN4PQ13434 485 aaPredicted RBP6.23□□□□□ -1.41
SCARNA23-201ENST00000516060 ZNF579Q8NAF0 562 aaKnown RBP6.2□□□□□ -1.42
SCARNA23-201ENST00000516060 GALR2O43603 387 aaPredicted RBP6.17□□□□□ -1.42
SCARNA23-201ENST00000516060 ATXN8OSP0DMR3 200 aa6.17□□□□□ -1.42
SCARNA23-201ENST00000516060 PABPN1Q86U42 306 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCARNA23-201ENST00000516060 ZRANB1Q9UGI0 708 aa6.15□□□□□ -1.42
SCARNA23-201ENST00000516060 LCE2DQ5TA82 110 aaPredicted RBP6.14□□□□□ -1.43
SCARNA23-201ENST00000516060 SLC4A1APQ9BWU0 796 aaKnown RBP6.14□□□□□ -1.43
SCARNA23-201ENST00000516060 PELP1Q8IZL8 1130 aaKnown RBP6.11□□□□□ -1.43
SCARNA23-201ENST00000516060 ZBTB22O15209 634 aa6.1□□□□□ -1.43
SCARNA23-201ENST00000516060 POTEJP0CG39 1038 aa6.1□□□□□ -1.43
SCARNA23-201ENST00000516060 FAM163AQ96GL9 167 aaPredicted RBP6.07□□□□□ -1.44
SCARNA23-201ENST00000516060 PHF12Q96QT6 1004 aa6.04□□□□□ -1.44
SCARNA23-201ENST00000516060 METRNQ9UJH8 293 aa6.04□□□□□ -1.44
SCARNA23-201ENST00000516060 MAMSTRQ6ZN01 415 aa6.03□□□□□ -1.44
SCARNA23-201ENST00000516060 CREBZFQ9NS37 354 aa6.02□□□□□ -1.45
SCARNA23-201ENST00000516060 C7P10643 843 aa6.01□□□□□ -1.45
SCARNA23-201ENST00000516060 ASTLQ6HA08 431 aaPredicted RBP6.01□□□□□ -1.45
SCARNA23-201ENST00000516060 SLC39A7Q92504 469 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms