Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VRK2Q86Y07 AC100797.4-201ENST00000631653 1827 ntBASIC23.71■■□□□ 1.39
VRK2Q86Y07 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.71■■□□□ 1.39
VRK2Q86Y07 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VRK2Q86Y07 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.71■■□□□ 1.39
VRK2Q86Y07 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VRK2Q86Y07 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VRK2Q86Y07 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
VRK2Q86Y07 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VRK2Q86Y07 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.7■■□□□ 1.38
VRK2Q86Y07 MIR6090-201ENST00000622481 60 ntBASIC23.7■■□□□ 1.38
VRK2Q86Y07 AC108673.1-201ENST00000510422 1159 ntBASIC23.69■■□□□ 1.38
VRK2Q86Y07 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.69■■□□□ 1.38
VRK2Q86Y07 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VRK2Q86Y07 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
VRK2Q86Y07 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VRK2Q86Y07 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.68■■□□□ 1.38
VRK2Q86Y07 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VRK2Q86Y07 MIR3665-201ENST00000578708 105 ntBASIC23.68■■□□□ 1.38
VRK2Q86Y07 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VRK2Q86Y07 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.68■■□□□ 1.38
VRK2Q86Y07 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VRK2Q86Y07 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
VRK2Q86Y07 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
VRK2Q86Y07 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VRK2Q86Y07 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VRK2Q86Y07 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VRK2Q86Y07 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VRK2Q86Y07 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
VRK2Q86Y07 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VRK2Q86Y07 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VRK2Q86Y07 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VRK2Q86Y07 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
VRK2Q86Y07 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VRK2Q86Y07 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VRK2Q86Y07 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VRK2Q86Y07 AP006261.1-201ENST00000584783 668 ntBASIC23.62■■□□□ 1.37
VRK2Q86Y07 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
VRK2Q86Y07 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.62■■□□□ 1.37
VRK2Q86Y07 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
VRK2Q86Y07 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.61■■□□□ 1.37
VRK2Q86Y07 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
VRK2Q86Y07 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
VRK2Q86Y07 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VRK2Q86Y07 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VRK2Q86Y07 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
VRK2Q86Y07 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.59■■□□□ 1.37
VRK2Q86Y07 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.59■■□□□ 1.37
VRK2Q86Y07 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
VRK2Q86Y07 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
VRK2Q86Y07 AC135983.2-203ENST00000454486 1613 ntBASIC23.59■■□□□ 1.37
VRK2Q86Y07 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.59■■□□□ 1.37
VRK2Q86Y07 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
VRK2Q86Y07 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.58■■□□□ 1.37
VRK2Q86Y07 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.58■■□□□ 1.37
VRK2Q86Y07 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.58■■□□□ 1.37
VRK2Q86Y07 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
VRK2Q86Y07 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.57■■□□□ 1.36
VRK2Q86Y07 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VRK2Q86Y07 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.57■■□□□ 1.36
VRK2Q86Y07 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VRK2Q86Y07 BX255925.1-201ENST00000566954 1854 ntBASIC23.57■■□□□ 1.36
VRK2Q86Y07 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.57■■□□□ 1.36
VRK2Q86Y07 WHAMMP2-203ENST00000563942 1603 ntBASIC23.56■■□□□ 1.36
VRK2Q86Y07 AL162393.1-201ENST00000437852 946 ntBASIC23.56■■□□□ 1.36
VRK2Q86Y07 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VRK2Q86Y07 AC087741.3-201ENST00000624270 1347 ntBASIC23.56■■□□□ 1.36
VRK2Q86Y07 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VRK2Q86Y07 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRK2Q86Y07 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRK2Q86Y07 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.54■■□□□ 1.36
VRK2Q86Y07 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRK2Q86Y07 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VRK2Q86Y07 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
VRK2Q86Y07 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
VRK2Q86Y07 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
VRK2Q86Y07 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRK2Q86Y07 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.53■■□□□ 1.36
VRK2Q86Y07 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRK2Q86Y07 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRK2Q86Y07 LINC00273-201ENST00000539813 1452 ntBASIC23.52■■□□□ 1.36
VRK2Q86Y07 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRK2Q86Y07 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRK2Q86Y07 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRK2Q86Y07 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
VRK2Q86Y07 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 LINC01003-201ENST00000564834 1764 ntBASIC23.51■■□□□ 1.35
VRK2Q86Y07 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.51■■□□□ 1.35
VRK2Q86Y07 AL121749.1-202ENST00000609313 2153 ntBASIC23.51■■□□□ 1.35
VRK2Q86Y07 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRK2Q86Y07 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VRK2Q86Y07 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.5■■□□□ 1.35
VRK2Q86Y07 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VRK2Q86Y07 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
VRK2Q86Y07 AP002414.2-202ENST00000590929 1450 ntBASIC23.49■■□□□ 1.35
VRK2Q86Y07 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms