Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.01■■■□□ 2.23
RNF180Q86T96 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29■■■□□ 2.23
RNF180Q86T96 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
RNF180Q86T96 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
RNF180Q86T96 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF180Q86T96 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.97■■■□□ 2.23
RNF180Q86T96 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
RNF180Q86T96 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.96■■■□□ 2.23
RNF180Q86T96 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
RNF180Q86T96 AC135983.2-203ENST00000454486 1613 ntBASIC28.94■■■□□ 2.22
RNF180Q86T96 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.94■■■□□ 2.22
RNF180Q86T96 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF180Q86T96 AC127502.1-201ENST00000399971 1502 ntBASIC28.94■■■□□ 2.22
RNF180Q86T96 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
RNF180Q86T96 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
RNF180Q86T96 WHAMMP2-203ENST00000563942 1603 ntBASIC28.93■■■□□ 2.22
RNF180Q86T96 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RNF180Q86T96 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RNF180Q86T96 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RNF180Q86T96 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
RNF180Q86T96 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.91■■■□□ 2.22
RNF180Q86T96 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.91■■■□□ 2.22
RNF180Q86T96 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.9■■■□□ 2.22
RNF180Q86T96 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RNF180Q86T96 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
RNF180Q86T96 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RNF180Q86T96 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RNF180Q86T96 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RNF180Q86T96 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
RNF180Q86T96 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
RNF180Q86T96 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
RNF180Q86T96 AC148477.6-201ENST00000623746 465 ntBASIC28.88■■■□□ 2.21
RNF180Q86T96 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.88■■■□□ 2.21
RNF180Q86T96 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.88■■■□□ 2.21
RNF180Q86T96 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RNF180Q86T96 AC060814.1-201ENST00000554326 538 ntBASIC28.87■■■□□ 2.21
RNF180Q86T96 AL033527.3-201ENST00000566366 1196 ntBASIC28.87■■■□□ 2.21
RNF180Q86T96 AC110285.7-201ENST00000624417 1536 ntBASIC28.86■■■□□ 2.21
RNF180Q86T96 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
RNF180Q86T96 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.86■■■□□ 2.21
RNF180Q86T96 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
RNF180Q86T96 U85056.1-201ENST00000616429 682 ntBASIC28.85■■■□□ 2.21
RNF180Q86T96 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
RNF180Q86T96 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.85■■■□□ 2.21
RNF180Q86T96 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RNF180Q86T96 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RNF180Q86T96 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RNF180Q86T96 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RNF180Q86T96 AC018358.1-201ENST00000631079 1402 ntBASIC28.83■■■□□ 2.21
RNF180Q86T96 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
RNF180Q86T96 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RNF180Q86T96 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RNF180Q86T96 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
RNF180Q86T96 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.82■■■□□ 2.2
RNF180Q86T96 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RNF180Q86T96 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
RNF180Q86T96 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.79■■■□□ 2.2
RNF180Q86T96 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.79■■■□□ 2.2
RNF180Q86T96 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
RNF180Q86T96 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
RNF180Q86T96 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.77■■■□□ 2.2
RNF180Q86T96 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.77■■■□□ 2.2
RNF180Q86T96 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RNF180Q86T96 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.76■■■□□ 2.19
RNF180Q86T96 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
RNF180Q86T96 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.76■■■□□ 2.19
RNF180Q86T96 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RNF180Q86T96 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
RNF180Q86T96 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.74■■■□□ 2.19
RNF180Q86T96 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RNF180Q86T96 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
RNF180Q86T96 MIR219A2-201ENST00000608502 1504 ntBASIC28.74■■■□□ 2.19
RNF180Q86T96 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RNF180Q86T96 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RNF180Q86T96 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RNF180Q86T96 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.73■■■□□ 2.19
RNF180Q86T96 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RNF180Q86T96 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RNF180Q86T96 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF180Q86T96 TSPY13P-201ENST00000338964 914 ntBASIC28.71■■■□□ 2.19
RNF180Q86T96 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF180Q86T96 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF180Q86T96 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
RNF180Q86T96 AC092296.2-201ENST00000589470 999 ntBASIC28.7■■■□□ 2.18
RNF180Q86T96 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RNF180Q86T96 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
RNF180Q86T96 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF180Q86T96 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RNF180Q86T96 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF180Q86T96 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.69■■■□□ 2.18
RNF180Q86T96 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF180Q86T96 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
RNF180Q86T96 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.68■■■□□ 2.18
RNF180Q86T96 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
RNF180Q86T96 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RNF180Q86T96 KRT18P60-201ENST00000312876 1297 ntBASIC28.67■■■□□ 2.18
RNF180Q86T96 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.67■■■□□ 2.18
RNF180Q86T96 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
RNF180Q86T96 AC004987.1-201ENST00000428627 508 ntBASIC28.66■■■□□ 2.18
RNF180Q86T96 ECEL1P2-201ENST00000461596 1295 ntBASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms