Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
BRAT1Q6PJG6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
BRAT1Q6PJG6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
BRAT1Q6PJG6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
BRAT1Q6PJG6 CR559946.2-201ENST00000623684 991 ntBASIC25.88■■□□□ 1.73
BRAT1Q6PJG6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
BRAT1Q6PJG6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
BRAT1Q6PJG6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
BRAT1Q6PJG6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
BRAT1Q6PJG6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
BRAT1Q6PJG6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
BRAT1Q6PJG6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.85■■□□□ 1.73
BRAT1Q6PJG6 HLA-V-202ENST00000446817 847 ntBASIC25.85■■□□□ 1.73
BRAT1Q6PJG6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
BRAT1Q6PJG6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
BRAT1Q6PJG6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
BRAT1Q6PJG6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
BRAT1Q6PJG6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
BRAT1Q6PJG6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.84■■□□□ 1.73
BRAT1Q6PJG6 AC016575.1-201ENST00000607026 382 ntBASIC25.84■■□□□ 1.73
BRAT1Q6PJG6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.83■■□□□ 1.73
BRAT1Q6PJG6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
BRAT1Q6PJG6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.83■■□□□ 1.73
BRAT1Q6PJG6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
BRAT1Q6PJG6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.83■■□□□ 1.73
BRAT1Q6PJG6 AL139393.2-201ENST00000608721 2025 ntBASIC25.83■■□□□ 1.73
BRAT1Q6PJG6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.82■■□□□ 1.72
BRAT1Q6PJG6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
BRAT1Q6PJG6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRAT1Q6PJG6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.82■■□□□ 1.72
BRAT1Q6PJG6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
BRAT1Q6PJG6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.81■■□□□ 1.72
BRAT1Q6PJG6 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.8■■□□□ 1.72
BRAT1Q6PJG6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BRAT1Q6PJG6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
BRAT1Q6PJG6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.79■■□□□ 1.72
BRAT1Q6PJG6 MIR639-201ENST00000384974 98 ntBASIC25.79■■□□□ 1.72
BRAT1Q6PJG6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.79■■□□□ 1.72
BRAT1Q6PJG6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
BRAT1Q6PJG6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
BRAT1Q6PJG6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.78■■□□□ 1.72
BRAT1Q6PJG6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
BRAT1Q6PJG6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.77■■□□□ 1.72
BRAT1Q6PJG6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
BRAT1Q6PJG6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
BRAT1Q6PJG6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.76■■□□□ 1.71
BRAT1Q6PJG6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
BRAT1Q6PJG6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.74■■□□□ 1.71
BRAT1Q6PJG6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.74■■□□□ 1.71
BRAT1Q6PJG6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
BRAT1Q6PJG6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.73■■□□□ 1.71
BRAT1Q6PJG6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.73■■□□□ 1.71
BRAT1Q6PJG6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.73■■□□□ 1.71
BRAT1Q6PJG6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
BRAT1Q6PJG6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
BRAT1Q6PJG6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
BRAT1Q6PJG6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
BRAT1Q6PJG6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
BRAT1Q6PJG6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
BRAT1Q6PJG6 AC110285.7-201ENST00000624417 1536 ntBASIC25.7■■□□□ 1.7
BRAT1Q6PJG6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
BRAT1Q6PJG6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
BRAT1Q6PJG6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.7■■□□□ 1.7
BRAT1Q6PJG6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
BRAT1Q6PJG6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
BRAT1Q6PJG6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
BRAT1Q6PJG6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.69■■□□□ 1.7
BRAT1Q6PJG6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
BRAT1Q6PJG6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.68■■□□□ 1.7
BRAT1Q6PJG6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
BRAT1Q6PJG6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.68■■□□□ 1.7
BRAT1Q6PJG6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
BRAT1Q6PJG6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.68■■□□□ 1.7
BRAT1Q6PJG6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
BRAT1Q6PJG6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRAT1Q6PJG6 MIR4449-201ENST00000578365 66 ntBASIC25.67■■□□□ 1.7
BRAT1Q6PJG6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRAT1Q6PJG6 AC100797.4-201ENST00000631653 1827 ntBASIC25.66■■□□□ 1.7
BRAT1Q6PJG6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.66■■□□□ 1.7
BRAT1Q6PJG6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.66■■□□□ 1.7
BRAT1Q6PJG6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
BRAT1Q6PJG6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.64■■□□□ 1.7
BRAT1Q6PJG6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
BRAT1Q6PJG6 ABCB10P3-201ENST00000561950 2166 ntBASIC25.63■■□□□ 1.69
BRAT1Q6PJG6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
BRAT1Q6PJG6 AC008813.1-201ENST00000536597 885 ntBASIC25.63■■□□□ 1.69
BRAT1Q6PJG6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.63■■□□□ 1.69
BRAT1Q6PJG6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
BRAT1Q6PJG6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
BRAT1Q6PJG6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
BRAT1Q6PJG6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
BRAT1Q6PJG6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
BRAT1Q6PJG6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
BRAT1Q6PJG6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
BRAT1Q6PJG6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRAT1Q6PJG6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
BRAT1Q6PJG6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.61■■□□□ 1.69
BRAT1Q6PJG6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.61■■□□□ 1.69
BRAT1Q6PJG6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
BRAT1Q6PJG6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms