Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF213Q63HN8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF213Q63HN8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF213Q63HN8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF213Q63HN8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RNF213Q63HN8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF213Q63HN8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF213Q63HN8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF213Q63HN8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF213Q63HN8 AC129492.7-201ENST00000622992 756 ntBASIC14.28□□□□□ -0.12
RNF213Q63HN8 DUX4L18-201ENST00000553347 1267 ntBASIC14.28□□□□□ -0.12
RNF213Q63HN8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC14.27□□□□□ -0.12
RNF213Q63HN8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF213Q63HN8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF213Q63HN8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF213Q63HN8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF213Q63HN8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF213Q63HN8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF213Q63HN8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
RNF213Q63HN8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.25□□□□□ -0.13
RNF213Q63HN8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF213Q63HN8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RNF213Q63HN8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF213Q63HN8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF213Q63HN8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF213Q63HN8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RNF213Q63HN8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF213Q63HN8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF213Q63HN8 RARRES2P6-201ENST00000567333 442 ntBASIC14.22□□□□□ -0.13
RNF213Q63HN8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RNF213Q63HN8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RNF213Q63HN8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF213Q63HN8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RNF213Q63HN8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.22□□□□□ -0.13
RNF213Q63HN8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF213Q63HN8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RNF213Q63HN8 AC103834.1-201ENST00000520383 144 ntBASIC14.21□□□□□ -0.13
RNF213Q63HN8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF213Q63HN8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RNF213Q63HN8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.14
RNF213Q63HN8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF213Q63HN8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF213Q63HN8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF213Q63HN8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF213Q63HN8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF213Q63HN8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF213Q63HN8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF213Q63HN8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RNF213Q63HN8 AC092296.2-201ENST00000589470 999 ntBASIC14.18□□□□□ -0.14
RNF213Q63HN8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF213Q63HN8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RNF213Q63HN8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF213Q63HN8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF213Q63HN8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RNF213Q63HN8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF213Q63HN8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RNF213Q63HN8 SPCS2P3-201ENST00000500401 656 ntBASIC14.17□□□□□ -0.14
RNF213Q63HN8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RNF213Q63HN8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF213Q63HN8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF213Q63HN8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
RNF213Q63HN8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF213Q63HN8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF213Q63HN8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF213Q63HN8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF213Q63HN8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF213Q63HN8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF213Q63HN8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RNF213Q63HN8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF213Q63HN8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF213Q63HN8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF213Q63HN8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF213Q63HN8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF213Q63HN8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RNF213Q63HN8 AL139246.5-201ENST00000606645 996 ntBASIC14.15□□□□□ -0.14
RNF213Q63HN8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RNF213Q63HN8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF213Q63HN8 BHLHE23-202ENST00000612929 1109 ntBASIC14.15□□□□□ -0.14
RNF213Q63HN8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF213Q63HN8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF213Q63HN8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF213Q63HN8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF213Q63HN8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF213Q63HN8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF213Q63HN8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF213Q63HN8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF213Q63HN8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC14.12□□□□□ -0.15
RNF213Q63HN8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF213Q63HN8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF213Q63HN8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF213Q63HN8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF213Q63HN8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.1□□□□□ -0.15
RNF213Q63HN8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF213Q63HN8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF213Q63HN8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF213Q63HN8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF213Q63HN8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF213Q63HN8 AC010980.1-201ENST00000587192 1142 ntBASIC14.09□□□□□ -0.15
RNF213Q63HN8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF213Q63HN8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms