Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
WNT3P56703 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
WNT3P56703 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
WNT3P56703 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
WNT3P56703 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
WNT3P56703 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
WNT3P56703 DUX4L28-201ENST00000623687 678 ntBASIC24.34■■□□□ 1.49
WNT3P56703 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
WNT3P56703 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
WNT3P56703 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
WNT3P56703 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
WNT3P56703 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
WNT3P56703 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
WNT3P56703 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
WNT3P56703 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.32■■□□□ 1.48
WNT3P56703 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
WNT3P56703 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.32■■□□□ 1.48
WNT3P56703 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
WNT3P56703 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
WNT3P56703 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.31■■□□□ 1.48
WNT3P56703 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.31■■□□□ 1.48
WNT3P56703 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
WNT3P56703 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
WNT3P56703 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
WNT3P56703 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.3■■□□□ 1.48
WNT3P56703 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
WNT3P56703 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
WNT3P56703 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.29■■□□□ 1.48
WNT3P56703 AC100797.4-201ENST00000631653 1827 ntBASIC24.29■■□□□ 1.48
WNT3P56703 MIR3665-201ENST00000578708 105 ntBASIC24.29■■□□□ 1.48
WNT3P56703 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
WNT3P56703 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
WNT3P56703 AL121749.1-202ENST00000609313 2153 ntBASIC24.28■■□□□ 1.48
WNT3P56703 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
WNT3P56703 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.28■■□□□ 1.48
WNT3P56703 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
WNT3P56703 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
WNT3P56703 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
WNT3P56703 AC005559.1-201ENST00000589661 871 ntBASIC24.27■■□□□ 1.48
WNT3P56703 BX255925.1-201ENST00000566954 1854 ntBASIC24.27■■□□□ 1.48
WNT3P56703 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
WNT3P56703 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
WNT3P56703 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
WNT3P56703 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.26■■□□□ 1.47
WNT3P56703 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
WNT3P56703 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
WNT3P56703 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
WNT3P56703 AC087741.3-201ENST00000624270 1347 ntBASIC24.25■■□□□ 1.47
WNT3P56703 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
WNT3P56703 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.24■■□□□ 1.47
WNT3P56703 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
WNT3P56703 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.24■■□□□ 1.47
WNT3P56703 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
WNT3P56703 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
WNT3P56703 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
WNT3P56703 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
WNT3P56703 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.23■■□□□ 1.47
WNT3P56703 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
WNT3P56703 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
WNT3P56703 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
WNT3P56703 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
WNT3P56703 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
WNT3P56703 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
WNT3P56703 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
WNT3P56703 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
WNT3P56703 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.2■■□□□ 1.46
WNT3P56703 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
WNT3P56703 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.19■■□□□ 1.46
WNT3P56703 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.19■■□□□ 1.46
WNT3P56703 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
WNT3P56703 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.18■■□□□ 1.46
WNT3P56703 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.18■■□□□ 1.46
WNT3P56703 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
WNT3P56703 LINC01003-201ENST00000564834 1764 ntBASIC24.18■■□□□ 1.46
WNT3P56703 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
WNT3P56703 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
WNT3P56703 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
WNT3P56703 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
WNT3P56703 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.17■■□□□ 1.46
WNT3P56703 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
WNT3P56703 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
WNT3P56703 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
WNT3P56703 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
WNT3P56703 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
WNT3P56703 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
WNT3P56703 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
WNT3P56703 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
WNT3P56703 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
WNT3P56703 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
WNT3P56703 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
WNT3P56703 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.15■■□□□ 1.46
WNT3P56703 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.15■■□□□ 1.46
WNT3P56703 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
WNT3P56703 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
WNT3P56703 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
WNT3P56703 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.14■■□□□ 1.45
WNT3P56703 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
WNT3P56703 MIR6090-201ENST00000622481 60 ntBASIC24.14■■□□□ 1.45
WNT3P56703 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
WNT3P56703 AC135983.2-203ENST00000454486 1613 ntBASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms