Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC6A11P48066 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC6A11P48066 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC6A11P48066 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.4■■□□□ 1.82
SLC6A11P48066 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SLC6A11P48066 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SLC6A11P48066 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SLC6A11P48066 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC6A11P48066 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.82
SLC6A11P48066 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC6A11P48066 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SLC6A11P48066 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.39■■□□□ 1.82
SLC6A11P48066 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
SLC6A11P48066 GPX1-201ENST00000419349 1106 ntBASIC26.38■■□□□ 1.81
SLC6A11P48066 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A11P48066 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A11P48066 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.37■■□□□ 1.81
SLC6A11P48066 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SLC6A11P48066 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SLC6A11P48066 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SLC6A11P48066 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.34■■□□□ 1.81
SLC6A11P48066 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
SLC6A11P48066 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.33■■□□□ 1.81
SLC6A11P48066 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.33■■□□□ 1.81
SLC6A11P48066 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.32■■□□□ 1.8
SLC6A11P48066 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
SLC6A11P48066 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.32■■□□□ 1.8
SLC6A11P48066 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC6A11P48066 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.31■■□□□ 1.8
SLC6A11P48066 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC6A11P48066 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.31■■□□□ 1.8
SLC6A11P48066 AC110285.7-201ENST00000624417 1536 ntBASIC26.31■■□□□ 1.8
SLC6A11P48066 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SLC6A11P48066 RARRES2P2-201ENST00000394842 485 ntBASIC26.31■■□□□ 1.8
SLC6A11P48066 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC6A11P48066 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SLC6A11P48066 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.3■■□□□ 1.8
SLC6A11P48066 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.3■■□□□ 1.8
SLC6A11P48066 AC008813.1-201ENST00000536597 885 ntBASIC26.3■■□□□ 1.8
SLC6A11P48066 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SLC6A11P48066 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SLC6A11P48066 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
SLC6A11P48066 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC6A11P48066 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC6A11P48066 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC6A11P48066 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SLC6A11P48066 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC6A11P48066 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC6A11P48066 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC6A11P48066 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
SLC6A11P48066 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC6A11P48066 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.26■■□□□ 1.79
SLC6A11P48066 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.26■■□□□ 1.79
SLC6A11P48066 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SLC6A11P48066 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC6A11P48066 AC022413.1-201ENST00000624602 984 ntBASIC26.25■■□□□ 1.79
SLC6A11P48066 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC6A11P48066 RNF126P1-201ENST00000567452 1320 ntBASIC26.24■■□□□ 1.79
SLC6A11P48066 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.24■■□□□ 1.79
SLC6A11P48066 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SLC6A11P48066 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.23■■□□□ 1.79
SLC6A11P48066 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.23■■□□□ 1.79
SLC6A11P48066 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC6A11P48066 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SLC6A11P48066 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC6A11P48066 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC6A11P48066 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC6A11P48066 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.22■■□□□ 1.79
SLC6A11P48066 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC6A11P48066 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A11P48066 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A11P48066 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A11P48066 ST7-AS1-201ENST00000456775 1889 ntBASIC26.21■■□□□ 1.79
SLC6A11P48066 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SLC6A11P48066 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SLC6A11P48066 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLC6A11P48066 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SLC6A11P48066 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.2■■□□□ 1.78
SLC6A11P48066 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLC6A11P48066 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
SLC6A11P48066 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC6A11P48066 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC6A11P48066 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SLC6A11P48066 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC6A11P48066 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SLC6A11P48066 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.18■■□□□ 1.78
SLC6A11P48066 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC6A11P48066 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC6A11P48066 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.17■■□□□ 1.78
SLC6A11P48066 ABHD17AP5-201ENST00000580133 923 ntBASIC26.17■■□□□ 1.78
SLC6A11P48066 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SLC6A11P48066 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SLC6A11P48066 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.16■■□□□ 1.78
SLC6A11P48066 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLC6A11P48066 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.16■■□□□ 1.78
SLC6A11P48066 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SLC6A11P48066 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
SLC6A11P48066 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLC6A11P48066 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SLC6A11P48066 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms