Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTR3AP46098 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HTR3AP46098 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
HTR3AP46098 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
HTR3AP46098 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.49■■□□□ 1.35
HTR3AP46098 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HTR3AP46098 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
HTR3AP46098 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
HTR3AP46098 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.48■■□□□ 1.35
HTR3AP46098 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.47■■□□□ 1.35
HTR3AP46098 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HTR3AP46098 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.47■■□□□ 1.35
HTR3AP46098 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.47■■□□□ 1.35
HTR3AP46098 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HTR3AP46098 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.45■■□□□ 1.35
HTR3AP46098 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
HTR3AP46098 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HTR3AP46098 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
HTR3AP46098 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.44■■□□□ 1.34
HTR3AP46098 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.44■■□□□ 1.34
HTR3AP46098 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
HTR3AP46098 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HTR3AP46098 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HTR3AP46098 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.43■■□□□ 1.34
HTR3AP46098 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
HTR3AP46098 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HTR3AP46098 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HTR3AP46098 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HTR3AP46098 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HTR3AP46098 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3AP46098 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3AP46098 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3AP46098 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.41■■□□□ 1.34
HTR3AP46098 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3AP46098 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
HTR3AP46098 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HTR3AP46098 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.4■■□□□ 1.34
HTR3AP46098 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HTR3AP46098 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HTR3AP46098 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HTR3AP46098 RPS2P35-201ENST00000443417 897 ntBASIC23.39■■□□□ 1.33
HTR3AP46098 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HTR3AP46098 AC142086.6-201ENST00000621154 1765 ntBASIC23.39■■□□□ 1.33
HTR3AP46098 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.39■■□□□ 1.33
HTR3AP46098 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HTR3AP46098 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.38■■□□□ 1.33
HTR3AP46098 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HTR3AP46098 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.37■■□□□ 1.33
HTR3AP46098 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.37■■□□□ 1.33
HTR3AP46098 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HTR3AP46098 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.37■■□□□ 1.33
HTR3AP46098 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
HTR3AP46098 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HTR3AP46098 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HTR3AP46098 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.36■■□□□ 1.33
HTR3AP46098 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.36■■□□□ 1.33
HTR3AP46098 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HTR3AP46098 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
HTR3AP46098 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HTR3AP46098 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HTR3AP46098 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HTR3AP46098 LINC00273-201ENST00000539813 1452 ntBASIC23.35■■□□□ 1.33
HTR3AP46098 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HTR3AP46098 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
HTR3AP46098 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HTR3AP46098 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
HTR3AP46098 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.33■■□□□ 1.33
HTR3AP46098 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HTR3AP46098 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HTR3AP46098 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HTR3AP46098 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HTR3AP46098 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HTR3AP46098 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTR3AP46098 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HTR3AP46098 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HTR3AP46098 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.31■■□□□ 1.32
HTR3AP46098 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HTR3AP46098 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.31■■□□□ 1.32
HTR3AP46098 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.3■■□□□ 1.32
HTR3AP46098 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
HTR3AP46098 DUX4L29-201ENST00000425409 679 ntBASIC23.3■■□□□ 1.32
HTR3AP46098 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HTR3AP46098 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HTR3AP46098 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
HTR3AP46098 AC135983.2-203ENST00000454486 1613 ntBASIC23.3■■□□□ 1.32
HTR3AP46098 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR3AP46098 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR3AP46098 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR3AP46098 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HTR3AP46098 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
HTR3AP46098 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.29■■□□□ 1.32
HTR3AP46098 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.29■■□□□ 1.32
HTR3AP46098 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
HTR3AP46098 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HTR3AP46098 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.28■■□□□ 1.32
HTR3AP46098 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTR3AP46098 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HTR3AP46098 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
HTR3AP46098 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.28■■□□□ 1.32
HTR3AP46098 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms