Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
MCM4P33991 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
MCM4P33991 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
MCM4P33991 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
MCM4P33991 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
MCM4P33991 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
MCM4P33991 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
MCM4P33991 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.16■■■□□ 2.42
MCM4P33991 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.16■■■□□ 2.42
MCM4P33991 PKM-204ENST00000449901 2526 ntTSL 2 BASIC30.16■■■□□ 2.42
MCM4P33991 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
MCM4P33991 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
MCM4P33991 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
MCM4P33991 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
MCM4P33991 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.15■■■□□ 2.42
MCM4P33991 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
MCM4P33991 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
MCM4P33991 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.12■■■□□ 2.41
MCM4P33991 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.12■■■□□ 2.41
MCM4P33991 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
MCM4P33991 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
MCM4P33991 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
MCM4P33991 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.1■■■□□ 2.41
MCM4P33991 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
MCM4P33991 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
MCM4P33991 AC097358.2-201ENST00000607541 1159 ntBASIC30.09■■■□□ 2.41
MCM4P33991 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
MCM4P33991 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
MCM4P33991 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
MCM4P33991 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
MCM4P33991 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
MCM4P33991 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.07■■■□□ 2.4
MCM4P33991 AC010864.1-201ENST00000609407 1511 ntBASIC30.07■■■□□ 2.4
MCM4P33991 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.07■■■□□ 2.4
MCM4P33991 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
MCM4P33991 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
MCM4P33991 LINC01003-201ENST00000564834 1764 ntBASIC30.06■■■□□ 2.4
MCM4P33991 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
MCM4P33991 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
MCM4P33991 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
MCM4P33991 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.04■■■□□ 2.4
MCM4P33991 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
MCM4P33991 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
MCM4P33991 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
MCM4P33991 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.03■■■□□ 2.4
MCM4P33991 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
MCM4P33991 AC136428.2-201ENST00000563187 214 ntBASIC30.02■■■□□ 2.4
MCM4P33991 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
MCM4P33991 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
MCM4P33991 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.01■■■□□ 2.39
MCM4P33991 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.01■■■□□ 2.39
MCM4P33991 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30■■■□□ 2.39
MCM4P33991 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
MCM4P33991 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
MCM4P33991 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC30■■■□□ 2.39
MCM4P33991 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
MCM4P33991 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.98■■■□□ 2.39
MCM4P33991 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
MCM4P33991 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.97■■■□□ 2.39
MCM4P33991 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.97■■■□□ 2.39
MCM4P33991 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
MCM4P33991 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.95■■■□□ 2.39
MCM4P33991 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
MCM4P33991 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
MCM4P33991 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
MCM4P33991 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.95■■■□□ 2.38
MCM4P33991 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.94■■■□□ 2.38
MCM4P33991 AC091060.1-201ENST00000623524 1766 ntBASIC29.94■■■□□ 2.38
MCM4P33991 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
MCM4P33991 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
MCM4P33991 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
MCM4P33991 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.92■■■□□ 2.38
MCM4P33991 WASH5P-204ENST00000632292 975 ntBASIC29.92■■■□□ 2.38
MCM4P33991 AP004833.2-201ENST00000532228 1454 ntBASIC29.92■■■□□ 2.38
MCM4P33991 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
MCM4P33991 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
MCM4P33991 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
MCM4P33991 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
MCM4P33991 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.9■■■□□ 2.38
MCM4P33991 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.9■■■□□ 2.38
MCM4P33991 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
MCM4P33991 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.9■■■□□ 2.38
MCM4P33991 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.9■■■□□ 2.38
MCM4P33991 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.89■■■□□ 2.38
MCM4P33991 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
MCM4P33991 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
MCM4P33991 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
MCM4P33991 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.88■■■□□ 2.37
MCM4P33991 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.88■■■□□ 2.37
MCM4P33991 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
MCM4P33991 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
MCM4P33991 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
MCM4P33991 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
MCM4P33991 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
MCM4P33991 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.86■■■□□ 2.37
MCM4P33991 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
MCM4P33991 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.85■■■□□ 2.37
MCM4P33991 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
MCM4P33991 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.84■■■□□ 2.37
MCM4P33991 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms