Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
COL11A2P13942 AC135983.2-203ENST00000454486 1613 ntBASIC32.31■■■□□ 2.76
COL11A2P13942 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COL11A2P13942 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.3■■■□□ 2.76
COL11A2P13942 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.29■■■□□ 2.76
COL11A2P13942 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
COL11A2P13942 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
COL11A2P13942 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.27■■■□□ 2.76
COL11A2P13942 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.27■■■□□ 2.76
COL11A2P13942 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.27■■■□□ 2.76
COL11A2P13942 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
COL11A2P13942 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.26■■■□□ 2.75
COL11A2P13942 AC148477.6-201ENST00000623746 465 ntBASIC32.26■■■□□ 2.75
COL11A2P13942 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.25■■■□□ 2.75
COL11A2P13942 AC018358.1-201ENST00000631079 1402 ntBASIC32.25■■■□□ 2.75
COL11A2P13942 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
COL11A2P13942 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.25■■■□□ 2.75
COL11A2P13942 AL033527.3-201ENST00000566366 1196 ntBASIC32.25■■■□□ 2.75
COL11A2P13942 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.24■■■□□ 2.75
COL11A2P13942 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
COL11A2P13942 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.23■■■□□ 2.75
COL11A2P13942 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL11A2P13942 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
COL11A2P13942 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL11A2P13942 U85056.1-201ENST00000616429 682 ntBASIC32.23■■■□□ 2.75
COL11A2P13942 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.22■■■□□ 2.75
COL11A2P13942 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.22■■■□□ 2.75
COL11A2P13942 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
COL11A2P13942 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
COL11A2P13942 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.21■■■□□ 2.75
COL11A2P13942 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.21■■■□□ 2.75
COL11A2P13942 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
COL11A2P13942 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.2■■■□□ 2.75
COL11A2P13942 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
COL11A2P13942 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.74
COL11A2P13942 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.2■■■□□ 2.74
COL11A2P13942 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
COL11A2P13942 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.74
COL11A2P13942 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.19■■■□□ 2.74
COL11A2P13942 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
COL11A2P13942 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
COL11A2P13942 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.18■■■□□ 2.74
COL11A2P13942 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
COL11A2P13942 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.17■■■□□ 2.74
COL11A2P13942 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.17■■■□□ 2.74
COL11A2P13942 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.17■■■□□ 2.74
COL11A2P13942 AC092296.2-201ENST00000589470 999 ntBASIC32.17■■■□□ 2.74
COL11A2P13942 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
COL11A2P13942 KRT18P60-201ENST00000312876 1297 ntBASIC32.16■■■□□ 2.74
COL11A2P13942 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
COL11A2P13942 AC127502.1-201ENST00000399971 1502 ntBASIC32.15■■■□□ 2.74
COL11A2P13942 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL11A2P13942 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL11A2P13942 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL11A2P13942 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
COL11A2P13942 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.13■■■□□ 2.73
COL11A2P13942 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
COL11A2P13942 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
COL11A2P13942 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
COL11A2P13942 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.09■■■□□ 2.73
COL11A2P13942 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.09■■■□□ 2.73
COL11A2P13942 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.08■■■□□ 2.73
COL11A2P13942 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.07■■■□□ 2.73
COL11A2P13942 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
COL11A2P13942 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
COL11A2P13942 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.07■■■□□ 2.72
COL11A2P13942 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
COL11A2P13942 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
COL11A2P13942 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
COL11A2P13942 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.06■■■□□ 2.72
COL11A2P13942 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.05■■■□□ 2.72
COL11A2P13942 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
COL11A2P13942 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.04■■■□□ 2.72
COL11A2P13942 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
COL11A2P13942 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
COL11A2P13942 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.03■■■□□ 2.72
COL11A2P13942 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
COL11A2P13942 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
COL11A2P13942 AC110285.7-201ENST00000624417 1536 ntBASIC32.02■■■□□ 2.72
COL11A2P13942 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
COL11A2P13942 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.01■■■□□ 2.72
COL11A2P13942 AL157400.5-201ENST00000507624 621 ntBASIC32■■■□□ 2.71
COL11A2P13942 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
COL11A2P13942 MIR219A2-201ENST00000608502 1504 ntBASIC32■■■□□ 2.71
COL11A2P13942 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32■■■□□ 2.71
COL11A2P13942 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
COL11A2P13942 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
COL11A2P13942 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
COL11A2P13942 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
COL11A2P13942 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL11A2P13942 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
COL11A2P13942 TSPY13P-201ENST00000338964 914 ntBASIC31.97■■■□□ 2.71
COL11A2P13942 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL11A2P13942 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
COL11A2P13942 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
COL11A2P13942 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
COL11A2P13942 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
COL11A2P13942 AC004987.1-201ENST00000428627 508 ntBASIC31.95■■■□□ 2.7
COL11A2P13942 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
COL11A2P13942 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms