Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
COL11A2P13942 AC135983.2-203ENST00000454486 1613 ntBASIC32.31■■■□□ 2.76
COL11A2P13942 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COL11A2P13942 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.3■■■□□ 2.76
COL11A2P13942 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.29■■■□□ 2.76
COL11A2P13942 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
COL11A2P13942 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
COL11A2P13942 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.27■■■□□ 2.76
COL11A2P13942 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.27■■■□□ 2.76
COL11A2P13942 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.27■■■□□ 2.76
COL11A2P13942 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
COL11A2P13942 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.26■■■□□ 2.75
COL11A2P13942 AC148477.6-201ENST00000623746 465 ntBASIC32.26■■■□□ 2.75
COL11A2P13942 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.25■■■□□ 2.75
COL11A2P13942 AC018358.1-201ENST00000631079 1402 ntBASIC32.25■■■□□ 2.75
COL11A2P13942 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
COL11A2P13942 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.25■■■□□ 2.75
COL11A2P13942 AL033527.3-201ENST00000566366 1196 ntBASIC32.25■■■□□ 2.75
COL11A2P13942 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.24■■■□□ 2.75
COL11A2P13942 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
COL11A2P13942 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.23■■■□□ 2.75
COL11A2P13942 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL11A2P13942 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
COL11A2P13942 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL11A2P13942 U85056.1-201ENST00000616429 682 ntBASIC32.23■■■□□ 2.75
COL11A2P13942 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.22■■■□□ 2.75
COL11A2P13942 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.22■■■□□ 2.75
COL11A2P13942 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
COL11A2P13942 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
COL11A2P13942 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.21■■■□□ 2.75
COL11A2P13942 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.21■■■□□ 2.75
COL11A2P13942 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
COL11A2P13942 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.2■■■□□ 2.75
COL11A2P13942 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
COL11A2P13942 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.74
COL11A2P13942 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.2■■■□□ 2.74
COL11A2P13942 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
COL11A2P13942 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.74
COL11A2P13942 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.19■■■□□ 2.74
COL11A2P13942 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
COL11A2P13942 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
COL11A2P13942 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.18■■■□□ 2.74
COL11A2P13942 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
COL11A2P13942 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.17■■■□□ 2.74
COL11A2P13942 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.17■■■□□ 2.74
COL11A2P13942 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.17■■■□□ 2.74
COL11A2P13942 AC092296.2-201ENST00000589470 999 ntBASIC32.17■■■□□ 2.74
COL11A2P13942 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
COL11A2P13942 KRT18P60-201ENST00000312876 1297 ntBASIC32.16■■■□□ 2.74
COL11A2P13942 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
COL11A2P13942 AC127502.1-201ENST00000399971 1502 ntBASIC32.15■■■□□ 2.74
COL11A2P13942 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL11A2P13942 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL11A2P13942 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
COL11A2P13942 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
COL11A2P13942 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.13■■■□□ 2.73
COL11A2P13942 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
COL11A2P13942 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
COL11A2P13942 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
COL11A2P13942 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.09■■■□□ 2.73
COL11A2P13942 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.09■■■□□ 2.73
COL11A2P13942 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.08■■■□□ 2.73
COL11A2P13942 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.07■■■□□ 2.73
COL11A2P13942 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
COL11A2P13942 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
COL11A2P13942 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.07■■■□□ 2.72
COL11A2P13942 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
COL11A2P13942 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
COL11A2P13942 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
COL11A2P13942 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.06■■■□□ 2.72
COL11A2P13942 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.05■■■□□ 2.72
COL11A2P13942 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
COL11A2P13942 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.04■■■□□ 2.72
COL11A2P13942 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
COL11A2P13942 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
COL11A2P13942 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.03■■■□□ 2.72
COL11A2P13942 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
COL11A2P13942 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
COL11A2P13942 AC110285.7-201ENST00000624417 1536 ntBASIC32.02■■■□□ 2.72
COL11A2P13942 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
COL11A2P13942 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.01■■■□□ 2.72
COL11A2P13942 AL157400.5-201ENST00000507624 621 ntBASIC32■■■□□ 2.71
COL11A2P13942 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
COL11A2P13942 MIR219A2-201ENST00000608502 1504 ntBASIC32■■■□□ 2.71
COL11A2P13942 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32■■■□□ 2.71
COL11A2P13942 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
COL11A2P13942 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
COL11A2P13942 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
COL11A2P13942 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
COL11A2P13942 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL11A2P13942 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
COL11A2P13942 TSPY13P-201ENST00000338964 914 ntBASIC31.97■■■□□ 2.71
COL11A2P13942 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
COL11A2P13942 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
COL11A2P13942 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
COL11A2P13942 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
COL11A2P13942 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
COL11A2P13942 AC004987.1-201ENST00000428627 508 ntBASIC31.95■■■□□ 2.7
COL11A2P13942 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
COL11A2P13942 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms