Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PF4V1P10720 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PF4V1P10720 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.22■□□□□ 0.83
PF4V1P10720 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PF4V1P10720 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PF4V1P10720 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PF4V1P10720 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PF4V1P10720 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PF4V1P10720 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PF4V1P10720 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
PF4V1P10720 DUX4L13-201ENST00000554103 1267 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PF4V1P10720 DUX4L15-201ENST00000611059 1267 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 DUX4L23-201ENST00000615195 1269 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 DUX4L24-201ENST00000617576 1269 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 DUX4L22-201ENST00000618238 1269 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 DUX4L20-201ENST00000619712 1269 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 DUX4L21-201ENST00000622058 1269 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 DUX4L10-201ENST00000622460 1267 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 DUX4L25-201ENST00000624915 1269 ntBASIC20.2■□□□□ 0.82
PF4V1P10720 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PF4V1P10720 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.19■□□□□ 0.82
PF4V1P10720 LINC00273-201ENST00000539813 1452 ntBASIC20.19■□□□□ 0.82
PF4V1P10720 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PF4V1P10720 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.19■□□□□ 0.82
PF4V1P10720 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.19■□□□□ 0.82
PF4V1P10720 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PF4V1P10720 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PF4V1P10720 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
PF4V1P10720 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PF4V1P10720 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.18■□□□□ 0.82
PF4V1P10720 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.18■□□□□ 0.82
PF4V1P10720 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PF4V1P10720 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PF4V1P10720 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.18■□□□□ 0.82
PF4V1P10720 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.18■□□□□ 0.82
PF4V1P10720 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.17■□□□□ 0.82
PF4V1P10720 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.17■□□□□ 0.82
PF4V1P10720 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PF4V1P10720 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PF4V1P10720 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PF4V1P10720 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PF4V1P10720 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.16■□□□□ 0.82
PF4V1P10720 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PF4V1P10720 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.16■□□□□ 0.82
PF4V1P10720 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.16■□□□□ 0.82
PF4V1P10720 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PF4V1P10720 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PF4V1P10720 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PF4V1P10720 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PF4V1P10720 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PF4V1P10720 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PF4V1P10720 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.15■□□□□ 0.82
PF4V1P10720 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PF4V1P10720 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PF4V1P10720 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PF4V1P10720 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PF4V1P10720 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PF4V1P10720 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.13■□□□□ 0.81
PF4V1P10720 HSD17B1P1-201ENST00000590052 955 ntBASIC20.13■□□□□ 0.81
PF4V1P10720 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PF4V1P10720 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PF4V1P10720 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PF4V1P10720 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PF4V1P10720 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PF4V1P10720 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PF4V1P10720 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PF4V1P10720 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.11■□□□□ 0.81
PF4V1P10720 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PF4V1P10720 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PF4V1P10720 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PF4V1P10720 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PF4V1P10720 AC135983.2-203ENST00000454486 1613 ntBASIC20.1■□□□□ 0.81
PF4V1P10720 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
PF4V1P10720 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.1■□□□□ 0.81
PF4V1P10720 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PF4V1P10720 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PF4V1P10720 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PF4V1P10720 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PF4V1P10720 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PF4V1P10720 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.09■□□□□ 0.81
PF4V1P10720 WHAMMP2-203ENST00000563942 1603 ntBASIC20.09■□□□□ 0.81
PF4V1P10720 AL139393.2-201ENST00000608721 2025 ntBASIC20.09■□□□□ 0.81
PF4V1P10720 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PF4V1P10720 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PF4V1P10720 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PF4V1P10720 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PF4V1P10720 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PF4V1P10720 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PF4V1P10720 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PF4V1P10720 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PF4V1P10720 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.06■□□□□ 0.8
PF4V1P10720 AP004833.2-201ENST00000532228 1454 ntBASIC20.05■□□□□ 0.8
PF4V1P10720 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PF4V1P10720 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.05■□□□□ 0.8
PF4V1P10720 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.05■□□□□ 0.8
PF4V1P10720 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.05■□□□□ 0.8
PF4V1P10720 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.04■□□□□ 0.8
PF4V1P10720 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.04■□□□□ 0.8
PF4V1P10720 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms