Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
APPP05067 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
APPP05067 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
APPP05067 AC139426.1-201ENST00000568218 2529 ntBASIC30.76■■■□□ 2.51
APPP05067 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
APPP05067 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
APPP05067 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.75■■■□□ 2.51
APPP05067 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.75■■■□□ 2.51
APPP05067 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
APPP05067 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.74■■■□□ 2.51
APPP05067 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
APPP05067 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
APPP05067 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
APPP05067 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
APPP05067 DUX4L13-201ENST00000554103 1267 ntBASIC30.73■■■□□ 2.51
APPP05067 DUX4L15-201ENST00000611059 1267 ntBASIC30.73■■■□□ 2.51
APPP05067 DUX4L23-201ENST00000615195 1269 ntBASIC30.73■■■□□ 2.51
APPP05067 DUX4L24-201ENST00000617576 1269 ntBASIC30.73■■■□□ 2.51
APPP05067 DUX4L22-201ENST00000618238 1269 ntBASIC30.73■■■□□ 2.51
APPP05067 DUX4L20-201ENST00000619712 1269 ntBASIC30.73■■■□□ 2.51
APPP05067 DUX4L21-201ENST00000622058 1269 ntBASIC30.73■■■□□ 2.51
APPP05067 DUX4L10-201ENST00000622460 1267 ntBASIC30.73■■■□□ 2.51
APPP05067 DUX4L25-201ENST00000624915 1269 ntBASIC30.73■■■□□ 2.51
APPP05067 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
APPP05067 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
APPP05067 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
APPP05067 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
APPP05067 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.71■■■□□ 2.51
APPP05067 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.71■■■□□ 2.51
APPP05067 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
APPP05067 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
APPP05067 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
APPP05067 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
APPP05067 ABCB10P3-201ENST00000561950 2166 ntBASIC30.71■■■□□ 2.51
APPP05067 AP004833.2-201ENST00000532228 1454 ntBASIC30.7■■■□□ 2.51
APPP05067 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
APPP05067 MIR3648-2-201ENST00000581792 180 ntBASIC30.7■■■□□ 2.51
APPP05067 MIR3648-1-201ENST00000615959 180 ntBASIC30.7■■■□□ 2.51
APPP05067 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.7■■■□□ 2.51
APPP05067 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
APPP05067 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
APPP05067 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.69■■■□□ 2.5
APPP05067 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.69■■■□□ 2.5
APPP05067 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
APPP05067 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.69■■■□□ 2.5
APPP05067 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
APPP05067 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.68■■■□□ 2.5
APPP05067 CR559946.2-201ENST00000623684 991 ntBASIC30.68■■■□□ 2.5
APPP05067 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
APPP05067 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.67■■■□□ 2.5
APPP05067 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
APPP05067 AC016575.1-201ENST00000607026 382 ntBASIC30.67■■■□□ 2.5
APPP05067 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
APPP05067 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
APPP05067 HLA-V-202ENST00000446817 847 ntBASIC30.66■■■□□ 2.5
APPP05067 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.66■■■□□ 2.5
APPP05067 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
APPP05067 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.66■■■□□ 2.5
APPP05067 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
APPP05067 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
APPP05067 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
APPP05067 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
APPP05067 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
APPP05067 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.64■■■□□ 2.5
APPP05067 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.64■■■□□ 2.5
APPP05067 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
APPP05067 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.64■■■□□ 2.5
APPP05067 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.64■■■□□ 2.5
APPP05067 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.63■■■□□ 2.49
APPP05067 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.63■■■□□ 2.49
APPP05067 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.63■■■□□ 2.49
APPP05067 AC100797.4-201ENST00000631653 1827 ntBASIC30.62■■■□□ 2.49
APPP05067 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
APPP05067 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
APPP05067 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.62■■■□□ 2.49
APPP05067 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
APPP05067 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
APPP05067 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
APPP05067 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.61■■■□□ 2.49
APPP05067 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
APPP05067 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
APPP05067 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.6■■■□□ 2.49
APPP05067 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.6■■■□□ 2.49
APPP05067 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
APPP05067 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.59■■■□□ 2.49
APPP05067 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.59■■■□□ 2.49
APPP05067 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.59■■■□□ 2.49
APPP05067 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.59■■■□□ 2.49
APPP05067 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
APPP05067 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
APPP05067 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.58■■■□□ 2.49
APPP05067 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.58■■■□□ 2.49
APPP05067 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
APPP05067 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.57■■■□□ 2.48
APPP05067 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
APPP05067 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.57■■■□□ 2.48
APPP05067 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
APPP05067 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
APPP05067 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
APPP05067 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms