Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HIST1H2ABP04908 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HIST1H2ABP04908 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HIST1H2ABP04908 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HIST1H2ABP04908 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HIST1H2ABP04908 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.17■■□□□ 1.3
HIST1H2ABP04908 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HIST1H2ABP04908 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.16■■□□□ 1.3
HIST1H2ABP04908 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIST1H2ABP04908 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIST1H2ABP04908 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.16■■□□□ 1.3
HIST1H2ABP04908 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIST1H2ABP04908 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST1H2ABP04908 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST1H2ABP04908 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST1H2ABP04908 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST1H2ABP04908 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST1H2ABP04908 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIST1H2ABP04908 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HIST1H2ABP04908 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
HIST1H2ABP04908 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HIST1H2ABP04908 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
HIST1H2ABP04908 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIST1H2ABP04908 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIST1H2ABP04908 MIR6090-201ENST00000622481 60 ntBASIC23.13■■□□□ 1.29
HIST1H2ABP04908 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.13■■□□□ 1.29
HIST1H2ABP04908 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HIST1H2ABP04908 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIST1H2ABP04908 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIST1H2ABP04908 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HIST1H2ABP04908 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.12■■□□□ 1.29
HIST1H2ABP04908 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
HIST1H2ABP04908 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIST1H2ABP04908 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIST1H2ABP04908 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIST1H2ABP04908 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.1■■□□□ 1.29
HIST1H2ABP04908 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HIST1H2ABP04908 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HIST1H2ABP04908 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HIST1H2ABP04908 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HIST1H2ABP04908 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.1■■□□□ 1.29
HIST1H2ABP04908 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIST1H2ABP04908 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HIST1H2ABP04908 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
HIST1H2ABP04908 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HIST1H2ABP04908 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.08■■□□□ 1.29
HIST1H2ABP04908 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.08■■□□□ 1.29
HIST1H2ABP04908 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
HIST1H2ABP04908 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
HIST1H2ABP04908 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HIST1H2ABP04908 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.07■■□□□ 1.28
HIST1H2ABP04908 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HIST1H2ABP04908 AC100797.4-201ENST00000631653 1827 ntBASIC23.07■■□□□ 1.28
HIST1H2ABP04908 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HIST1H2ABP04908 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.06■■□□□ 1.28
HIST1H2ABP04908 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HIST1H2ABP04908 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.06■■□□□ 1.28
HIST1H2ABP04908 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HIST1H2ABP04908 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HIST1H2ABP04908 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
HIST1H2ABP04908 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.05■■□□□ 1.28
HIST1H2ABP04908 AC087741.3-201ENST00000624270 1347 ntBASIC23.05■■□□□ 1.28
HIST1H2ABP04908 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HIST1H2ABP04908 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HIST1H2ABP04908 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
HIST1H2ABP04908 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HIST1H2ABP04908 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HIST1H2ABP04908 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HIST1H2ABP04908 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HIST1H2ABP04908 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HIST1H2ABP04908 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
HIST1H2ABP04908 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
HIST1H2ABP04908 AL162393.1-201ENST00000437852 946 ntBASIC23.03■■□□□ 1.28
HIST1H2ABP04908 AC044849.2-201ENST00000606596 710 ntBASIC23.03■■□□□ 1.28
HIST1H2ABP04908 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HIST1H2ABP04908 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
HIST1H2ABP04908 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.03■■□□□ 1.28
HIST1H2ABP04908 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HIST1H2ABP04908 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
HIST1H2ABP04908 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.02■■□□□ 1.28
HIST1H2ABP04908 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.02■■□□□ 1.28
HIST1H2ABP04908 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.02■■□□□ 1.28
HIST1H2ABP04908 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HIST1H2ABP04908 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HIST1H2ABP04908 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HIST1H2ABP04908 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
HIST1H2ABP04908 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.01■■□□□ 1.27
HIST1H2ABP04908 AC135983.2-203ENST00000454486 1613 ntBASIC23■■□□□ 1.27
HIST1H2ABP04908 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23■■□□□ 1.27
HIST1H2ABP04908 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HIST1H2ABP04908 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23■■□□□ 1.27
HIST1H2ABP04908 LINC00273-201ENST00000539813 1452 ntBASIC22.98■■□□□ 1.27
HIST1H2ABP04908 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.98■■□□□ 1.27
HIST1H2ABP04908 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
HIST1H2ABP04908 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.98■■□□□ 1.27
HIST1H2ABP04908 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HIST1H2ABP04908 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HIST1H2ABP04908 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.97■■□□□ 1.27
HIST1H2ABP04908 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HIST1H2ABP04908 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms