Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.06■□□□□ 0.8
SCGB2A1O75556 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCGB2A1O75556 AC005559.1-201ENST00000589661 871 ntBASIC20.05■□□□□ 0.8
SCGB2A1O75556 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCGB2A1O75556 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.04■□□□□ 0.8
SCGB2A1O75556 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SCGB2A1O75556 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.04■□□□□ 0.8
SCGB2A1O75556 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SCGB2A1O75556 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCGB2A1O75556 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SCGB2A1O75556 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCGB2A1O75556 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SCGB2A1O75556 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.03■□□□□ 0.8
SCGB2A1O75556 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
SCGB2A1O75556 AC127502.1-201ENST00000399971 1502 ntBASIC20.03■□□□□ 0.8
SCGB2A1O75556 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.03■□□□□ 0.8
SCGB2A1O75556 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCGB2A1O75556 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCGB2A1O75556 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.03■□□□□ 0.8
SCGB2A1O75556 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.03■□□□□ 0.8
SCGB2A1O75556 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SCGB2A1O75556 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCGB2A1O75556 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCGB2A1O75556 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCGB2A1O75556 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCGB2A1O75556 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCGB2A1O75556 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.01■□□□□ 0.79
SCGB2A1O75556 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SCGB2A1O75556 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SCGB2A1O75556 DRD5P2-201ENST00000421395 2012 ntBASIC20■□□□□ 0.79
SCGB2A1O75556 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCGB2A1O75556 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCGB2A1O75556 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
SCGB2A1O75556 AC108673.1-201ENST00000510422 1159 ntBASIC19.99■□□□□ 0.79
SCGB2A1O75556 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.99■□□□□ 0.79
SCGB2A1O75556 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCGB2A1O75556 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCGB2A1O75556 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCGB2A1O75556 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCGB2A1O75556 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.98■□□□□ 0.79
SCGB2A1O75556 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCGB2A1O75556 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCGB2A1O75556 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCGB2A1O75556 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCGB2A1O75556 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCGB2A1O75556 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.97■□□□□ 0.79
SCGB2A1O75556 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCGB2A1O75556 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.97■□□□□ 0.79
SCGB2A1O75556 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCGB2A1O75556 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCGB2A1O75556 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCGB2A1O75556 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCGB2A1O75556 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCGB2A1O75556 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.96■□□□□ 0.79
SCGB2A1O75556 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.96■□□□□ 0.79
SCGB2A1O75556 SUZ12P1-203ENST00000578195 985 ntBASIC19.96■□□□□ 0.79
SCGB2A1O75556 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCGB2A1O75556 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCGB2A1O75556 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCGB2A1O75556 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCGB2A1O75556 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCGB2A1O75556 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCGB2A1O75556 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.94■□□□□ 0.78
SCGB2A1O75556 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCGB2A1O75556 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCGB2A1O75556 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SCGB2A1O75556 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCGB2A1O75556 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SCGB2A1O75556 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SCGB2A1O75556 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCGB2A1O75556 MIR3665-201ENST00000578708 105 ntBASIC19.93■□□□□ 0.78
SCGB2A1O75556 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCGB2A1O75556 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCGB2A1O75556 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCGB2A1O75556 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCGB2A1O75556 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.93■□□□□ 0.78
SCGB2A1O75556 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCGB2A1O75556 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SCGB2A1O75556 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.92■□□□□ 0.78
SCGB2A1O75556 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
SCGB2A1O75556 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCGB2A1O75556 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCGB2A1O75556 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCGB2A1O75556 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCGB2A1O75556 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.91■□□□□ 0.78
SCGB2A1O75556 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCGB2A1O75556 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.91■□□□□ 0.78
SCGB2A1O75556 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCGB2A1O75556 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.9■□□□□ 0.78
SCGB2A1O75556 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SCGB2A1O75556 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SCGB2A1O75556 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.9■□□□□ 0.78
SCGB2A1O75556 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCGB2A1O75556 AP006261.1-201ENST00000584783 668 ntBASIC19.9■□□□□ 0.78
SCGB2A1O75556 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.9■□□□□ 0.78
SCGB2A1O75556 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCGB2A1O75556 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCGB2A1O75556 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.89■□□□□ 0.77
SCGB2A1O75556 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SCGB2A1O75556 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms