Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.87■■■□□ 2.85
CACNA1FO60840 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.87■■■□□ 2.85
CACNA1FO60840 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.86■■■□□ 2.85
CACNA1FO60840 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.86■■■□□ 2.85
CACNA1FO60840 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.86■■■□□ 2.85
CACNA1FO60840 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CACNA1FO60840 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
CACNA1FO60840 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CACNA1FO60840 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.84■■■□□ 2.85
CACNA1FO60840 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.84■■■□□ 2.85
CACNA1FO60840 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
CACNA1FO60840 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CACNA1FO60840 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CACNA1FO60840 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.83■■■□□ 2.85
CACNA1FO60840 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CACNA1FO60840 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.83■■■□□ 2.85
CACNA1FO60840 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
CACNA1FO60840 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.82■■■□□ 2.84
CACNA1FO60840 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
CACNA1FO60840 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.82■■■□□ 2.84
CACNA1FO60840 AC016575.1-201ENST00000607026 382 ntBASIC32.81■■■□□ 2.84
CACNA1FO60840 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.81■■■□□ 2.84
CACNA1FO60840 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
CACNA1FO60840 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CACNA1FO60840 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CACNA1FO60840 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.79■■■□□ 2.84
CACNA1FO60840 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.79■■■□□ 2.84
CACNA1FO60840 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.79■■■□□ 2.84
CACNA1FO60840 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CACNA1FO60840 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.78■■■□□ 2.84
CACNA1FO60840 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CACNA1FO60840 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.78■■■□□ 2.84
CACNA1FO60840 AL139393.2-201ENST00000608721 2025 ntBASIC32.78■■■□□ 2.84
CACNA1FO60840 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CACNA1FO60840 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.84
CACNA1FO60840 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.76■■■□□ 2.83
CACNA1FO60840 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
CACNA1FO60840 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CACNA1FO60840 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CACNA1FO60840 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.75■■■□□ 2.83
CACNA1FO60840 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC32.74■■■□□ 2.83
CACNA1FO60840 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
CACNA1FO60840 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CACNA1FO60840 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
CACNA1FO60840 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CACNA1FO60840 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
CACNA1FO60840 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CACNA1FO60840 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.72■■■□□ 2.83
CACNA1FO60840 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CACNA1FO60840 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.71■■■□□ 2.83
CACNA1FO60840 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CACNA1FO60840 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
CACNA1FO60840 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.69■■■□□ 2.82
CACNA1FO60840 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.69■■■□□ 2.82
CACNA1FO60840 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CACNA1FO60840 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CACNA1FO60840 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.68■■■□□ 2.82
CACNA1FO60840 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CACNA1FO60840 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
CACNA1FO60840 AC100797.4-201ENST00000631653 1827 ntBASIC32.68■■■□□ 2.82
CACNA1FO60840 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CACNA1FO60840 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.67■■■□□ 2.82
CACNA1FO60840 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.66■■■□□ 2.82
CACNA1FO60840 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CACNA1FO60840 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.65■■■□□ 2.82
CACNA1FO60840 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CACNA1FO60840 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.64■■■□□ 2.82
CACNA1FO60840 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.64■■■□□ 2.82
CACNA1FO60840 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CACNA1FO60840 ABCB10P3-201ENST00000561950 2166 ntBASIC32.63■■■□□ 2.81
CACNA1FO60840 AC148477.6-201ENST00000623746 465 ntBASIC32.62■■■□□ 2.81
CACNA1FO60840 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CACNA1FO60840 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CACNA1FO60840 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CACNA1FO60840 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CACNA1FO60840 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
CACNA1FO60840 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.61■■■□□ 2.81
CACNA1FO60840 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
CACNA1FO60840 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CACNA1FO60840 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CACNA1FO60840 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CACNA1FO60840 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.59■■■□□ 2.81
CACNA1FO60840 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.59■■■□□ 2.81
CACNA1FO60840 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
CACNA1FO60840 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CACNA1FO60840 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CACNA1FO60840 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CACNA1FO60840 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.58■■■□□ 2.81
CACNA1FO60840 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CACNA1FO60840 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.58■■■□□ 2.81
CACNA1FO60840 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.57■■■□□ 2.8
CACNA1FO60840 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.57■■■□□ 2.8
CACNA1FO60840 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CACNA1FO60840 MIR4449-201ENST00000578365 66 ntBASIC32.56■■■□□ 2.8
CACNA1FO60840 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.56■■■□□ 2.8
CACNA1FO60840 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.56■■■□□ 2.8
CACNA1FO60840 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CACNA1FO60840 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CACNA1FO60840 MIR639-201ENST00000384974 98 ntBASIC32.56■■■□□ 2.8
CACNA1FO60840 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.56■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms