Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
XRCC2O43543 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
XRCC2O43543 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
XRCC2O43543 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
XRCC2O43543 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
XRCC2O43543 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
XRCC2O43543 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
XRCC2O43543 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
XRCC2O43543 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
XRCC2O43543 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
XRCC2O43543 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
XRCC2O43543 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.18■■□□□ 1.14
XRCC2O43543 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
XRCC2O43543 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
XRCC2O43543 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.18■■□□□ 1.14
XRCC2O43543 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
XRCC2O43543 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
XRCC2O43543 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.17■■□□□ 1.14
XRCC2O43543 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.17■■□□□ 1.14
XRCC2O43543 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
XRCC2O43543 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
XRCC2O43543 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
XRCC2O43543 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
XRCC2O43543 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
XRCC2O43543 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.16■■□□□ 1.14
XRCC2O43543 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
XRCC2O43543 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
XRCC2O43543 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.15■■□□□ 1.14
XRCC2O43543 LINC00273-201ENST00000539813 1452 ntBASIC22.15■■□□□ 1.14
XRCC2O43543 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
XRCC2O43543 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
XRCC2O43543 AC135983.2-203ENST00000454486 1613 ntBASIC22.14■■□□□ 1.14
XRCC2O43543 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.14■■□□□ 1.13
XRCC2O43543 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.14■■□□□ 1.13
XRCC2O43543 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
XRCC2O43543 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.13■■□□□ 1.13
XRCC2O43543 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
XRCC2O43543 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
XRCC2O43543 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.12■■□□□ 1.13
XRCC2O43543 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRCC2O43543 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRCC2O43543 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.12■■□□□ 1.13
XRCC2O43543 AC100797.4-201ENST00000631653 1827 ntBASIC22.12■■□□□ 1.13
XRCC2O43543 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
XRCC2O43543 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
XRCC2O43543 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
XRCC2O43543 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
XRCC2O43543 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.11■■□□□ 1.13
XRCC2O43543 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.11■■□□□ 1.13
XRCC2O43543 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
XRCC2O43543 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
XRCC2O43543 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.1■■□□□ 1.13
XRCC2O43543 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
XRCC2O43543 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
XRCC2O43543 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
XRCC2O43543 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.09■■□□□ 1.13
XRCC2O43543 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
XRCC2O43543 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
XRCC2O43543 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
XRCC2O43543 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.07■■□□□ 1.12
XRCC2O43543 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
XRCC2O43543 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.07■■□□□ 1.12
XRCC2O43543 WHAMMP2-203ENST00000563942 1603 ntBASIC22.07■■□□□ 1.12
XRCC2O43543 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
XRCC2O43543 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.07■■□□□ 1.12
XRCC2O43543 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
XRCC2O43543 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
XRCC2O43543 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
XRCC2O43543 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
XRCC2O43543 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.06■■□□□ 1.12
XRCC2O43543 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
XRCC2O43543 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.06■■□□□ 1.12
XRCC2O43543 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.05■■□□□ 1.12
XRCC2O43543 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.05■■□□□ 1.12
XRCC2O43543 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
XRCC2O43543 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
XRCC2O43543 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
XRCC2O43543 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
XRCC2O43543 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
XRCC2O43543 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRCC2O43543 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.03■■□□□ 1.12
XRCC2O43543 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRCC2O43543 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.03■■□□□ 1.12
XRCC2O43543 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRCC2O43543 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRCC2O43543 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.03■■□□□ 1.12
XRCC2O43543 AP002414.2-202ENST00000590929 1450 ntBASIC22.03■■□□□ 1.12
XRCC2O43543 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
XRCC2O43543 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.02■■□□□ 1.12
XRCC2O43543 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
XRCC2O43543 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.02■■□□□ 1.12
XRCC2O43543 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
XRCC2O43543 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
XRCC2O43543 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
XRCC2O43543 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
XRCC2O43543 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
XRCC2O43543 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
XRCC2O43543 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
XRCC2O43543 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22■■□□□ 1.11
XRCC2O43543 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms