Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.1■■□□□ 1.61
PPM1DO15297 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPM1DO15297 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPM1DO15297 AC135983.2-203ENST00000454486 1613 ntBASIC25.1■■□□□ 1.61
PPM1DO15297 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PPM1DO15297 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.1■■□□□ 1.61
PPM1DO15297 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PPM1DO15297 WHAMMP2-203ENST00000563942 1603 ntBASIC25.09■■□□□ 1.61
PPM1DO15297 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PPM1DO15297 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
PPM1DO15297 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.09■■□□□ 1.61
PPM1DO15297 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PPM1DO15297 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPM1DO15297 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PPM1DO15297 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PPM1DO15297 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PPM1DO15297 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
PPM1DO15297 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PPM1DO15297 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.07■■□□□ 1.6
PPM1DO15297 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPM1DO15297 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
PPM1DO15297 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPM1DO15297 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPM1DO15297 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PPM1DO15297 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PPM1DO15297 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.05■■□□□ 1.6
PPM1DO15297 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.05■■□□□ 1.6
PPM1DO15297 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPM1DO15297 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPM1DO15297 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PPM1DO15297 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PPM1DO15297 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.03■■□□□ 1.6
PPM1DO15297 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PPM1DO15297 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPM1DO15297 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPM1DO15297 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPM1DO15297 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PPM1DO15297 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PPM1DO15297 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PPM1DO15297 HSD17B1P1-201ENST00000590052 955 ntBASIC25.01■■□□□ 1.59
PPM1DO15297 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PPM1DO15297 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25■■□□□ 1.59
PPM1DO15297 ABHD17AP3-201ENST00000503096 1137 ntBASIC25■■□□□ 1.59
PPM1DO15297 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25■■□□□ 1.59
PPM1DO15297 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
PPM1DO15297 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PPM1DO15297 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PPM1DO15297 AC139426.1-201ENST00000568218 2529 ntBASIC24.97■■□□□ 1.59
PPM1DO15297 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.97■■□□□ 1.59
PPM1DO15297 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PPM1DO15297 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.97■■□□□ 1.59
PPM1DO15297 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.97■■□□□ 1.59
PPM1DO15297 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
PPM1DO15297 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.96■■□□□ 1.59
PPM1DO15297 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
PPM1DO15297 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PPM1DO15297 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PPM1DO15297 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PPM1DO15297 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PPM1DO15297 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PPM1DO15297 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PPM1DO15297 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PPM1DO15297 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PPM1DO15297 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PPM1DO15297 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.93■■□□□ 1.58
PPM1DO15297 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
PPM1DO15297 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
PPM1DO15297 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PPM1DO15297 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.92■■□□□ 1.58
PPM1DO15297 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.92■■□□□ 1.58
PPM1DO15297 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PPM1DO15297 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PPM1DO15297 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
PPM1DO15297 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PPM1DO15297 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
PPM1DO15297 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPM1DO15297 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
PPM1DO15297 ABCB10P3-201ENST00000561950 2166 ntBASIC24.91■■□□□ 1.58
PPM1DO15297 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
PPM1DO15297 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.9■■□□□ 1.58
PPM1DO15297 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
PPM1DO15297 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPM1DO15297 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PPM1DO15297 AC110285.7-201ENST00000624417 1536 ntBASIC24.89■■□□□ 1.57
PPM1DO15297 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PPM1DO15297 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.88■■□□□ 1.57
PPM1DO15297 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.88■■□□□ 1.57
PPM1DO15297 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.87■■□□□ 1.57
PPM1DO15297 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPM1DO15297 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms