Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RBFOX3A6NFN3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
RBFOX3A6NFN3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBFOX3A6NFN3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RBFOX3A6NFN3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBFOX3A6NFN3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.27■□□□□ 0.84
RBFOX3A6NFN3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.27■□□□□ 0.84
RBFOX3A6NFN3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBFOX3A6NFN3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RBFOX3A6NFN3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RBFOX3A6NFN3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RBFOX3A6NFN3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RBFOX3A6NFN3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBFOX3A6NFN3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RBFOX3A6NFN3 AC091060.1-201ENST00000623524 1766 ntBASIC20.26■□□□□ 0.83
RBFOX3A6NFN3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RBFOX3A6NFN3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RBFOX3A6NFN3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RBFOX3A6NFN3 AC020928.2-201ENST00000588717 2197 ntBASIC20.25■□□□□ 0.83
RBFOX3A6NFN3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBFOX3A6NFN3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.24■□□□□ 0.83
RBFOX3A6NFN3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RBFOX3A6NFN3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBFOX3A6NFN3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.24■□□□□ 0.83
RBFOX3A6NFN3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBFOX3A6NFN3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RBFOX3A6NFN3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RBFOX3A6NFN3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RBFOX3A6NFN3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBFOX3A6NFN3 AC093323.1-202ENST00000635031 2045 ntBASIC20.22■□□□□ 0.83
RBFOX3A6NFN3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBFOX3A6NFN3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBFOX3A6NFN3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.22■□□□□ 0.83
RBFOX3A6NFN3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RBFOX3A6NFN3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.21■□□□□ 0.83
RBFOX3A6NFN3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RBFOX3A6NFN3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.21■□□□□ 0.83
RBFOX3A6NFN3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.21■□□□□ 0.83
RBFOX3A6NFN3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.21■□□□□ 0.83
RBFOX3A6NFN3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.21■□□□□ 0.83
RBFOX3A6NFN3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RBFOX3A6NFN3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RBFOX3A6NFN3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.2■□□□□ 0.82
RBFOX3A6NFN3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RBFOX3A6NFN3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RBFOX3A6NFN3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RBFOX3A6NFN3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RBFOX3A6NFN3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RBFOX3A6NFN3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RBFOX3A6NFN3 LINC01003-201ENST00000564834 1764 ntBASIC20.18■□□□□ 0.82
RBFOX3A6NFN3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RBFOX3A6NFN3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RBFOX3A6NFN3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBFOX3A6NFN3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBFOX3A6NFN3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBFOX3A6NFN3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RBFOX3A6NFN3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBFOX3A6NFN3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RBFOX3A6NFN3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RBFOX3A6NFN3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RBFOX3A6NFN3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RBFOX3A6NFN3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RBFOX3A6NFN3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RBFOX3A6NFN3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.15■□□□□ 0.82
RBFOX3A6NFN3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RBFOX3A6NFN3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RBFOX3A6NFN3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.14■□□□□ 0.81
RBFOX3A6NFN3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.14■□□□□ 0.81
RBFOX3A6NFN3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RBFOX3A6NFN3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.14■□□□□ 0.81
RBFOX3A6NFN3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RBFOX3A6NFN3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RBFOX3A6NFN3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RBFOX3A6NFN3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RBFOX3A6NFN3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RBFOX3A6NFN3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RBFOX3A6NFN3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RBFOX3A6NFN3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RBFOX3A6NFN3 AC145676.1-201ENST00000514988 2004 ntBASIC20.1■□□□□ 0.81
RBFOX3A6NFN3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.1■□□□□ 0.81
RBFOX3A6NFN3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.1■□□□□ 0.81
RBFOX3A6NFN3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RBFOX3A6NFN3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RBFOX3A6NFN3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RBFOX3A6NFN3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
RBFOX3A6NFN3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RBFOX3A6NFN3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
RBFOX3A6NFN3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RBFOX3A6NFN3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RBFOX3A6NFN3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RBFOX3A6NFN3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RBFOX3A6NFN3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms