Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TMEM235A6NFC5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM235A6NFC5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM235A6NFC5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM235A6NFC5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM235A6NFC5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
TMEM235A6NFC5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM235A6NFC5 AC135731.1-201ENST00000569415 2548 ntBASIC21.82■■□□□ 1.08
TMEM235A6NFC5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM235A6NFC5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM235A6NFC5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM235A6NFC5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM235A6NFC5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM235A6NFC5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TMEM235A6NFC5 LINC01003-201ENST00000564834 1764 ntBASIC21.81■■□□□ 1.08
TMEM235A6NFC5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM235A6NFC5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
TMEM235A6NFC5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM235A6NFC5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.79■■□□□ 1.08
TMEM235A6NFC5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM235A6NFC5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.79■■□□□ 1.08
TMEM235A6NFC5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TMEM235A6NFC5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM235A6NFC5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM235A6NFC5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM235A6NFC5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM235A6NFC5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
TMEM235A6NFC5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM235A6NFC5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM235A6NFC5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM235A6NFC5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEM235A6NFC5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM235A6NFC5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM235A6NFC5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.74■■□□□ 1.07
TMEM235A6NFC5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM235A6NFC5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.74■■□□□ 1.07
TMEM235A6NFC5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM235A6NFC5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM235A6NFC5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TMEM235A6NFC5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM235A6NFC5 AC127502.1-201ENST00000399971 1502 ntBASIC21.73■■□□□ 1.07
TMEM235A6NFC5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM235A6NFC5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM235A6NFC5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM235A6NFC5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM235A6NFC5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM235A6NFC5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM235A6NFC5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM235A6NFC5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TMEM235A6NFC5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TMEM235A6NFC5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
TMEM235A6NFC5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM235A6NFC5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM235A6NFC5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM235A6NFC5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM235A6NFC5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM235A6NFC5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.69■■□□□ 1.06
TMEM235A6NFC5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TMEM235A6NFC5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.68■■□□□ 1.06
TMEM235A6NFC5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.68■■□□□ 1.06
TMEM235A6NFC5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM235A6NFC5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM235A6NFC5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.68■■□□□ 1.06
TMEM235A6NFC5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TMEM235A6NFC5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM235A6NFC5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM235A6NFC5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.67■■□□□ 1.06
TMEM235A6NFC5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.67■■□□□ 1.06
TMEM235A6NFC5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM235A6NFC5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEM235A6NFC5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.66■■□□□ 1.06
TMEM235A6NFC5 AL449106.1-201ENST00000608517 1980 ntBASIC21.66■■□□□ 1.06
TMEM235A6NFC5 AC100797.4-201ENST00000631653 1827 ntBASIC21.66■■□□□ 1.06
TMEM235A6NFC5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEM235A6NFC5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.64■■□□□ 1.06
TMEM235A6NFC5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.64■■□□□ 1.05
TMEM235A6NFC5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM235A6NFC5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM235A6NFC5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEM235A6NFC5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM235A6NFC5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM235A6NFC5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TMEM235A6NFC5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMEM235A6NFC5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TMEM235A6NFC5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.62■■□□□ 1.05
TMEM235A6NFC5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM235A6NFC5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMEM235A6NFC5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM235A6NFC5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TMEM235A6NFC5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms