Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC35.56■■■■□ 3.28
SBNO1A3KN83 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
SBNO1A3KN83 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC35.56■■■■□ 3.28
SBNO1A3KN83 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
SBNO1A3KN83 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
SBNO1A3KN83 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
SBNO1A3KN83 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC35.55■■■■□ 3.28
SBNO1A3KN83 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC35.53■■■■□ 3.28
SBNO1A3KN83 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
SBNO1A3KN83 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC35.53■■■■□ 3.28
SBNO1A3KN83 AC018358.1-201ENST00000631079 1402 ntBASIC35.53■■■■□ 3.28
SBNO1A3KN83 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
SBNO1A3KN83 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
SBNO1A3KN83 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC35.51■■■■□ 3.27
SBNO1A3KN83 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC35.5■■■■□ 3.27
SBNO1A3KN83 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC35.5■■■■□ 3.27
SBNO1A3KN83 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
SBNO1A3KN83 AL033527.3-201ENST00000566366 1196 ntBASIC35.5■■■■□ 3.27
SBNO1A3KN83 U85056.1-201ENST00000616429 682 ntBASIC35.5■■■■□ 3.27
SBNO1A3KN83 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
SBNO1A3KN83 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC35.49■■■■□ 3.27
SBNO1A3KN83 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC35.49■■■■□ 3.27
SBNO1A3KN83 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
SBNO1A3KN83 CHST11-203ENST00000547956 936 ntTSL 2 BASIC35.49■■■■□ 3.27
SBNO1A3KN83 AC060814.1-201ENST00000554326 538 ntBASIC35.49■■■■□ 3.27
SBNO1A3KN83 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
SBNO1A3KN83 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
SBNO1A3KN83 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC35.48■■■■□ 3.27
SBNO1A3KN83 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
SBNO1A3KN83 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC35.47■■■■□ 3.27
SBNO1A3KN83 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
SBNO1A3KN83 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC35.45■■■■□ 3.27
SBNO1A3KN83 AC148477.6-201ENST00000623746 465 ntBASIC35.45■■■■□ 3.27
SBNO1A3KN83 AC135983.2-203ENST00000454486 1613 ntBASIC35.45■■■■□ 3.26
SBNO1A3KN83 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
SBNO1A3KN83 HYI-213ENST00000583037 1322 ntTSL 5 BASIC35.43■■■■□ 3.26
SBNO1A3KN83 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
SBNO1A3KN83 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
SBNO1A3KN83 WHAMMP2-203ENST00000563942 1603 ntBASIC35.42■■■■□ 3.26
SBNO1A3KN83 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC35.41■■■■□ 3.26
SBNO1A3KN83 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC35.41■■■■□ 3.26
SBNO1A3KN83 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC35.4■■■■□ 3.26
SBNO1A3KN83 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC35.4■■■■□ 3.26
SBNO1A3KN83 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
SBNO1A3KN83 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC35.4■■■■□ 3.26
SBNO1A3KN83 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
SBNO1A3KN83 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC35.38■■■■□ 3.25
SBNO1A3KN83 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
SBNO1A3KN83 GFER-205ENST00000569451 517 ntTSL 5 BASIC35.37■■■■□ 3.25
SBNO1A3KN83 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC35.36■■■■□ 3.25
SBNO1A3KN83 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC35.35■■■■□ 3.25
SBNO1A3KN83 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC35.35■■■■□ 3.25
SBNO1A3KN83 AC127502.1-201ENST00000399971 1502 ntBASIC35.34■■■■□ 3.25
SBNO1A3KN83 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
SBNO1A3KN83 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC35.34■■■■□ 3.25
SBNO1A3KN83 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC35.34■■■■□ 3.25
SBNO1A3KN83 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC35.33■■■■□ 3.25
SBNO1A3KN83 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
SBNO1A3KN83 AC092296.2-201ENST00000589470 999 ntBASIC35.33■■■■□ 3.25
SBNO1A3KN83 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC35.32■■■■□ 3.25
SBNO1A3KN83 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
SBNO1A3KN83 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC35.32■■■■□ 3.24
SBNO1A3KN83 KRT18P60-201ENST00000312876 1297 ntBASIC35.3■■■■□ 3.24
SBNO1A3KN83 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC35.3■■■■□ 3.24
SBNO1A3KN83 TSPY13P-201ENST00000338964 914 ntBASIC35.29■■■■□ 3.24
SBNO1A3KN83 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC35.29■■■■□ 3.24
SBNO1A3KN83 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
SBNO1A3KN83 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
SBNO1A3KN83 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
SBNO1A3KN83 AC110285.7-201ENST00000624417 1536 ntBASIC35.27■■■■□ 3.24
SBNO1A3KN83 RPS2-210ENST00000530225 765 ntTSL 2 BASIC35.26■■■■□ 3.24
SBNO1A3KN83 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC35.26■■■■□ 3.24
SBNO1A3KN83 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC35.26■■■■□ 3.24
SBNO1A3KN83 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
SBNO1A3KN83 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
SBNO1A3KN83 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
SBNO1A3KN83 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC35.25■■■■□ 3.23
SBNO1A3KN83 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
SBNO1A3KN83 AC004987.1-201ENST00000428627 508 ntBASIC35.25■■■■□ 3.23
SBNO1A3KN83 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
SBNO1A3KN83 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
SBNO1A3KN83 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC35.24■■■■□ 3.23
SBNO1A3KN83 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
SBNO1A3KN83 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC35.23■■■■□ 3.23
SBNO1A3KN83 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC35.23■■■■□ 3.23
SBNO1A3KN83 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC35.23■■■■□ 3.23
SBNO1A3KN83 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC35.22■■■■□ 3.23
SBNO1A3KN83 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
SBNO1A3KN83 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC35.22■■■■□ 3.23
SBNO1A3KN83 ATP5G2P3-201ENST00000429083 425 ntBASIC35.22■■■■□ 3.23
SBNO1A3KN83 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC35.22■■■■□ 3.23
SBNO1A3KN83 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC35.22■■■■□ 3.23
SBNO1A3KN83 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC35.22■■■■□ 3.23
SBNO1A3KN83 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
SBNO1A3KN83 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
SBNO1A3KN83 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
SBNO1A3KN83 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
SBNO1A3KN83 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23
SBNO1A3KN83 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC35.2■■■■□ 3.23
SBNO1A3KN83 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC35.2■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms